Xiphophorus hellerii (green swordtail): 116726454
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Entry
116726454 CDS
T07363
Name
(RefSeq) vitellogenin-1-like
Organism
xhe
Xiphophorus hellerii (green swordtail)
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Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
WipA_N
Motif
Other DBs
NCBI-GeneID:
116726454
NCBI-ProteinID:
XP_032429085
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Position
9:12951697..12960454
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AA seq
1718 aa
AA seq
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MKAVVLALTLAFVAGQHFDLVPEFAAGKTYVYKYEALLLSGLPEEGLARAGLKIRSKLLF
GRADQNTLMLKLVEPELFEYNGIWPNDSAIPATKLTAALAPQFAMPIKFEYTNSVVGKIF
APEGISPVVLNIHRGILNVLQLNIKKTHKVFDLQEVGTQGVCKTLYSISEDARNENILLT
KTRDLNNCQERLIKDMGLAYTEKCEKCQEETKNLRGTTTFSYTLKPVANAIMILKVDVNE
LIQFLPFSEDNGATQMRTKQSFEFLEIQKDPITPINAVYRHRGSLKYEFSNELLQTPIKL
VKISNAKAQTAEVMNQLATINVENLHENAPMKFLELVQLLRLARYEDLEMYWNQYKKMSP
HRHWFLDTIPAAGTPAAFRFIKEKFMAEEINTAEAVQALVAAVHMVTADPEVIKLFENLL
ASDKVERNPLLREIVFLGYGTMVYKYCNETAACPAELIKPIQERLSNAVAKNEEENIILY
IKVLGNAGHPSSFKSLTKIMPIHGTAAASLPMRIHVEAIMALRNIAKKEPRLVQDLVLEL
YMDKVLHPKLRMLSCIVLFETSPSMGLVATVANSVKTEENLQVASFTYSHMKSLSRNHAT
IDPDVAAACNVAMKLLSPKLDRLSLRYSKAVHVDIYKNSLMVGAAATAFYINDAANILPK
TAVAKTRAFLAGATAEALEIGASIDGLQELLLKNPALAENTDRITKMKRVIKALSEWRSL
PADKPLASIYVKLFGQEVAFASIEKPMIDQAVKYAKDLPIQEYGREILKALLVSGINFKY
AKPVLAAEVRRILPTVAGLPMELGLFSAAVAAASVKIKPNTSPRLPEDFPLQKLLETDIQ
LEAEVRPAVAMTTYAVMGLNTDVFQAFVIANANVHSVMPAKIAARLNIKEGDFKLEALPV
EVPENITFVNVTTFAGSRNIEELSKERITYLFPKKLLRPSSVKSSERASYADSMLSSSEL
LPEEAKYVKAIRQHKVRAFAKRYCAKNKGVGLRACFRFASENGAYIQDGLLYKLVGRHNF
SFSVTPIEGEVVERLEMEVKVGPNAAEKLVKRINLNEEETTEERGPVLMKLSKILSSKKN
SSSSSSSSSSSSSSSRSSKSSSSSSSRSSRKISLAARADNSNSSSSSSSSSRRSSSSSSS
SKRSSSSSSSSSSSSSSSSSSSSSSSRSSRSRRSSRRSKSGNLSRSSSSSDRTSSASSIA
SLFSGSSSSSRSSSSRSKQVTEKFQRLHNKENPSKSTSRSRSTSSSFEAIYNQKKFLREE
EIVVALIVRAVKVDKRMLGYQLAAYLDKPNARLQIIVSNLSADSNWRLCADGVVLSKHKV
TTRVAWGEQCKRYSANATGETGLVSSSPAARLRASWERLPSVLKRYGKMVNKYVHSKVLS
DLIHTKKKNSTRKISVIAVATSDRTIDFIVKTPMKSVYNVTVRLPMSMPIEEIKGLTPFD
EVIDKIHFMVSKAAAAECSFFEDTLYTFNNKSYKNKMPSSCYQVAAQDCTDELKFMVLLR
KDSSEQHHINVKISEIDIDMYPRDNNIIVKVNEMEIPLTSLPYRHPTASIEIRQSGEGLA
VFAPKHGLQEVYFDKKTWRIKIADWMKGKTCGLCGKADGEIRQEYHTPNGRVAKNSVSFA
HSWILPVESCRDASECRLKLESVQLEKQLTVHGDDSTCYSVEPVPRCLPGCLPIKTTPVT
VGFNCWSSDSESNVYDRSVDLRKTTQAHLACNCNTKCS
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggttgtactagccctgactttggccttcgtggctggacaacattttgatttg
gtccctgaatttgctgccggtaagacctacgtgtacaagtatgaagcattactcctcagc
ggtcttcctgaggaaggtttggcaagagctggactgaaaatcaggtccaaacttctcttc
ggccgagctgaccaaaatactttaatgctgaagcttgtggaacctgagctctttgagtac
aatggcatttggccaaacgactcagcaatcccagcaaccaagttgacggcagccctggca
cctcagtttgcgatgcccatcaagttcgaatacaccaatagtgttgttggtaaaatcttt
gctcctgaagggatttcgcctgtggtgctgaacatccacagaggcatcctgaatgttctc
cagctgaacatcaagaagacccacaaagtctttgacttgcaggaggttggaactcagggt
gtgtgcaagaccctctactccatcagtgaagatgcacgtaatgagaacatccttctgacc
aagaccagggacctgaacaactgccaggaaagactcattaaggacatgggattggcatac
actgagaagtgtgaaaagtgccaggaggaaaccaaaaacctgagaggtaccacaacattc
agctacaccttgaaaccagtcgctaatgccatcatgatcctgaaagtggacgttaatgag
ctgatccagttcttacctttctctgaggataatggagctactcaaatgaggaccaagcag
tcctttgagttccttgagattcagaaagaccccattacacctatcaacgctgtatataga
caccgtggatctctcaagtacgagttctccaacgaacttcttcagacacccattaagctt
gtcaagatcagcaatgcaaaggcccagactgcagaggtcatgaatcagcttgccaccatc
aacgtggagaatcttcatgaaaatgcacctatgaagtttttggaactggtacagctcctc
cgtcttgctcgctacgaagatttggaaatgtactggaaccagtacaaaaagatgtcccct
cacagacactggttcttggataccatccctgctgctggcactcccgctgcttttagattc
atcaaagagaagttcatggctgaggaaataaacactgctgaggctgttcaagcattggtt
gcagctgtgcacatggtgactgctgaccccgaggttatcaagctgttcgagaacctgtta
gcgagcgacaaagtagagagaaatccacttctgcgtgagattgtcttccttggatacggt
acaatggtttacaaatattgtaatgagacagcagcctgtccagctgaacttataaagcct
attcaagaacgactttcaaatgctgttgccaagaatgaggaagaaaacatcatcctgtac
ataaaggttttgggaaatgctggacatccatctagcttcaagtctctcactaagatcatg
cccatccatggcactgccgctgcatctctgccaatgagaattcatgttgaagccatcatg
gctttgaggaacattgcaaagaaggagcccagactggtccaggatctggttctcgagctc
tacatggacaaggttctccacccaaagctccgtatgctttcctgtattgttctcttcgag
acaagtccttccatgggtttggtggccactgttgccaactctgtgaaaacagaggagaat
ttgcaggtggccagcttcacttactctcacatgaagtccctgagtaggaaccatgcaacc
attgatcctgatgttgccgctgcttgcaacgttgccatgaaactattgagcccaaagctg
gacagactgagcctgcgttacagcaaagctgttcatgtggacatctacaaaaactccttg
atggttggtgctgctgcaactgctttttacatcaatgatgctgcaaatattttgccaaaa
actgctgttgcaaagaccagagccttcctcgctggagcaactgcagaagccctggagatc
ggagcctctattgatggactgcaggagctgcttttgaaaaaccctgctctcgctgaaaac
actgacaggatcaccaaaatgaagcgtgtcataaaggctctgtcagaatggagatccctg
cccgctgacaaacccctggcttctatctatgtcaagctctttggacaggaggttgccttt
gctagtatcgagaaacccatgatcgaccaggctgttaagtatgccaaggacttacccatt
caggaatatggaagagagattcttaaggctctgctcgtgtctggtatcaacttcaagtat
gctaagcctgtgctggctgctgaggtgagacgcattcttccaactgtcgctggtctcccg
atggagcttggtctgttcagtgctgctgtggctgcagcttctgttaaaatcaagccaaac
acatcaccacgcctgccagaagatttccccctccagaagctcctggaaacagacatccag
ctcgaggctgaggtcagaccagctgttgccatgaccacatatgcagttatgggactcaac
actgacgttttccaggcttttgtgatagcaaacgccaacgtccactctgttatgccagcc
aaaattgctgcaagactcaacatcaaagaaggagactttaagcttgaagctcttccagtt
gaagtgcctgaaaacatcacatttgtgaatgtgacaacctttgctgggtcaagaaacatc
gaggaactttctaaagagagaattacctacctcttccctaaaaaactcttgcgcccaagc
tcagtcaaatcatccgagcgagcttcctatgctgacagcatgctctcatcctccgagctc
cttcctgaggaagcaaaatatgtcaaggccattcgtcaacataaggttcgagcatttgcc
aagaggtactgcgctaagaacaaaggtgttggactgagggcctgtttcaggtttgccagt
gaaaatggtgcctacatccaagatggactcttgtacaaactggttggccgccacaacttc
tctttctctgtgacaccaattgaaggtgaagtggttgagagattggagatggaggttaaa
gttggaccaaatgctgcagagaaacttgttaaacgcatcaacctgaacgaagaggaaacc
acagaggaaagaggaccagttctgatgaagctcagcaaaatcctgtcttcaaaaaagaac
agctcctcatcttcctcctctagctcaagcagctcttcatccagccgttcctcaaagagc
tcctccagctcttcatctcgctccagccgtaagatcagtcttgcagcccgtgcggacaac
agcaacagcagcagcagcagcagtagcagcagccgcagaagcagcagcagcagtagcagt
tccaaacgcagtagcagtagcagcagcagcagcagcagcagcagcagcagcagcagcagc
agcagcagtagcagcagcagaagcagcagaagcaggagaagcagccgcagaagcaagagt
ggcaacttatcaagatccagcagcagttcagataggaccagctctgcatcaagcatcgca
tctctcttcagcggcagttcaagctcttctcgttccagctcctctcgctctaagcaagtg
actgagaagttccagaggttgcacaataaggagaatccctccaaatcaacttccagaagc
aggagcacttcctccagctttgaggccatctataatcagaaaaaattcctcagggaagag
gaaattgttgtggcattgatcgtccgtgctgtcaaagttgacaagaggatgctgggatac
caacttgctgcctaccttgacaaaccaaatgccagacttcagatcattgtctccaacctg
tctgctgatagcaactggaggctctgtgctgatggagttgtgttgagcaagcacaaagtt
acaactagggttgcctggggcgagcaatgcaagagatatagcgccaatgctacaggagag
actggtcttgtttcttcaagcccggcagctcgcctcagagcgtcctgggaaagactgcct
tctgtcctgaaacgttatggaaagatggtcaacaaatatgtccattccaaagtactgtca
gacttgattcacacaaagaaaaagaacagcaccaggaaaatctcagtcattgcagttgca
acttctgacaggacaattgacttcattgtgaaaactccaatgaaatctgtctacaatgtc
actgtgcgccttcccatgtctatgcccattgaagagatcaaaggtctcaccccatttgat
gaagtcattgacaagatccacttcatggtttcaaaggctgccgcagctgaatgcagcttc
tttgaagacacactctacacattcaacaacaagagctacaagaacaagatgccttcctct
tgctaccaggttgccgcacaggactgcactgatgaactgaagtttatggttctcctgagg
aaagattcttcagagcaacaccatatcaatgtcaaaatttctgagattgacatcgacatg
tatccaagggacaacaacatcattgtgaaggtcaacgaaatggaaattcccctcaccagc
ctgccttaccgccacccaacagcttccattgagatcagacagagtggagagggccttgct
gtatttgcacctaaacatggtctccaagaagtctactttgacaaaaagacatggaggatc
aaaattgctgactggatgaaaggtaagacctgtggactttgtggaaaggctgatggagaa
atcagacaggagtaccacactcccaacggacgcgtggctaagaactcagtcagctttgct
cactcctggattctgcctgttgaaagctgcagggatgcctctgagtgccgtctgaagctt
gaatctgtgcagctggaaaaacaattgaccgttcatggtgacgattccacatgctactct
gttgagcctgtacctcgctgtctgcctggatgcttgccaatcaagaccacccccgtcact
gttggtttcaactgctggtcatctgattctgagagcaatgtctatgacagaagtgtggac
ctgagaaagactacccaagctcacctggcttgcaactgcaacaccaagtgctcttaa
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integrated database retrieval system