Xiphophorus hellerii (green swordtail): 116726457
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Entry
116726457 CDS
T07363
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116726457 (gtpbp3)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
116726457 (gtpbp3)
Prokaryotic type
Methyltransferases
116726457 (gtpbp3)
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
SRPRB
AAA_16
GTP_EFTU
FtsK_SpoIIIE
DO-GTPase2
MMR_HSR1_Xtn
ABC_tran
Arf
NTPase_P4
MCM
Motif
Other DBs
NCBI-GeneID:
116726457
NCBI-ProteinID:
XP_032429088
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Position
9:complement(4886731..4909194)
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AA seq
520 aa
AA seq
DB search
MYYSAIMLPVSAVCGGIYRAVIRTLTTRNIPLYRCLSSGGRVLAGLADADTIFALSSGHG
RCGVAVVRISGSAAATALRCMVGLGNQLPPPRTALLRSITDPHSKEVLDRGLVLWFPAPH
SFTGEDSVEFHIHGGPAVITAVLQALGSVPGMRPADAGEFTRRAFHAGKLDLTEVEGLGD
LIHAETEAQRRQALRQMSGELGRLYQDWSHRLKRTLAHVEAFIDFSEDELIEEGVLDQVD
ISVCDLQAEIEQHLKDERRGERLRSGVHVVIAGATNAGKSSLLNTLCQRPAAIVSPIAGT
TRDVVESALDIGGFPVLLSDTAGLRESPDLVEQEGVRRARERVQQADLTLLVVDSTILPS
EEQEAAAFLLEHLRSVLSSQDQPGAGRCLLVLNKTDLLPEAYREKLNLELRRVSGLPPVC
LISCQTNEGLKDFLTVLQSSVKTMCGDPLSGAPTLTQARHRAHLQQCVAALAQYRRYRDS
DLALAAEGVRLALTSLGRITGRVGAEEILDIIFKDFCIGK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtattattctgcaataatgctgccagtttcagctgtctgtggaggaatatacagagct
gtgatccgcacacttacgacaagaaacatccctctgtatcgctgtctgtcctctggaggc
agagttctggctggactagcggatgctgacaccatcttcgctttgtcatcaggtcatggc
agatgtggggtagcagtggtccgcatcagtggttctgccgcagccacagcattaagatgt
atggttgggctcggaaatcagctgcctcctccacgaactgcgctgttacgtagcatcaca
gacccccactctaaagaagtactggaccgcggattggtcctctggttcccagcgcctcat
agtttcactggagaagacagtgtggagttccacatccacggtggtcctgctgtcattact
gctgtcttacaagctctaggaagcgtgcctggcatgaggcctgctgacgctggggagttc
acgcgcagggctttccacgcagggaagctcgatttaacggaggtggaaggcctcggggat
ctgatccatgcagagacggaggctcagcggagacaagctctcagacagatgtcaggagaa
ctgggacgcctctatcaggactggagccacaggctgaaacggactttagcccatgtcgaa
gcctttatagacttcagcgaggatgaactcatcgaggaaggagttttagaccaagtggac
atctcagtgtgtgatctgcaagcagagatcgagcagcatctgaaggatgagcggcgaggc
gagaggcttcgcagcggggttcatgtggtgatcgctggtgccaccaacgcagggaaaagt
agcctcctcaacacactctgccagagacctgcagctattgtttctcccattgctgggacc
accagagacgtagtggagtcggcgctggacatcgggggcttccctgtcctgctgagcgac
acggcgggcctcagagaaagcccagacctggtggagcaggagggggttcgtcgggccaga
gagagggtgcagcaggctgatctgactctgctggtcgttgactccaccatcctcccctcg
gaggagcaggaagctgcagcgttcctgctggagcacctgaggagcgtcctgtcctcccag
gaccagccgggagcaggcaggtgtctcctggtgctgaataaaactgatctgctccctgag
gcttacagagagaagctgaatctggaactgagaagagtctctggactcccacctgtctgc
ctgatttcctgtcaaaccaacgaaggactgaaggacttcctcactgtgttgcaaagcagc
gtcaaaacaatgtgtggtgaccctctctccggagcgcccaccctgacccaggcccgccac
agggcccacctgcagcagtgcgtggcggcgctggctcagtatcggcggtaccgcgactct
gacctcgctctggcagctgagggcgtccggttagcgctcaccagcctggggaggatcaca
ggacgagtcggggcagaggagatcctggatattatcttcaaagacttctgcatcggaaaa
taa
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