Xiphophorus hellerii (green swordtail): 116726477
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Entry
116726477 CDS
T07363
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116726477 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116726477 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116726477 (usp1)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116726477 (usp1)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116726477 (usp1)
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116726477 (usp1)
Ubiquitin system [BR:
xhe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116726477 (usp1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
116726477 (usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116726477
NCBI-ProteinID:
XP_032429115
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All DBs
Position
9:2832770..2840918
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AA seq
800 aa
AA seq
DB search
MSGLLAENAGAGQESPVKRNKLSLKFFQKDTKRALNFSEPQAEEAKTLEEEDSPASCDQV
VYGPAPCPSSPGLPIPCEKKENLLPFVGLNNLGNTCYLNSILQVLYYCPGFREGVKNLYD
LSKRPEKPKDETAKNEEPQSQQSECASETVPAHIELLGSFSSLMTSVEQLQSSFLLNPNG
FSEGELATPPRKILHTIRQLNPMYEGYLQHDAQEVLQCILGYIQEACDTIRKEQELERKE
EDDSDVKKETGVPSDSSFSGTESRASTDEVSGKRKSDTEVGNAKKKTKSKKSESTEENVC
RNKPFTRSKRKSSSDITVDSAQSKEGEQEEEEKKNLNPDEEKDEKASSKETSGKRKKRGT
LGWLRSSGKQPSIFSKFCSVGKISSTNPKPQNKSEPENRPSEEPKQKSTQQSVARKSATG
QIEKQQDVLGLMEKLFQGRLVLRTRCLECESFTERREDFQDISVPVLDDQPKSPEDLSEV
SPDPKPEMKTLTWAISQFASVERIVGEDKYFCETCHHYTEAERSLLFDKTPEVITIHLKR
FSASSLEVDPYAGLSKVNTPLQTPLTLSLNEWCTKPSAATGQQYELFAVVMHSGVTISSG
HYTTYIRMSDLKDAKVWLQDKKEKVTEEDVKESKEGAQTDENTTFDDGEVSVSLSTRGQR
RAGLASTKSGSKKLLEGGVGLLGGQRSLPNCDLGSGSKAANRDAAEGSKRRKTLSSSSQN
AGGLKKEPEDAPMAPPGGMEAAEQQALTSLLEYEGKWLLFDDSEVRLFVEEDFLRACSPE
TCSSSTPYLLFYKRMPEPRH
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtctgctggctgagaatgctggagcaggacaggagagtcctgtgaagaggaac
aaactttccttaaagttcttccagaaggacacaaaacgagctctgaatttctccgaacct
caagcagaagaggccaaaacactagaagaagaagattctccagccagctgtgatcaggtg
gtgtatggccccgccccctgcccatcttcacctggccttccaatcccatgtgagaagaaa
gagaaccttttgccttttgtgggtctcaataaccttggcaacacctgctacttaaacagc
atcttgcaggttctgtattactgccctggcttcagagaaggggtcaagaacctgtacgac
ctttccaaaagaccagaaaaaccaaaggatgaaactgctaaaaatgaagagcctcagagt
cagcagtcagagtgtgcgtctgagactgtgccggctcacatcgagctccttgggagcttc
agcagcctgatgacctcagtggagcagctgcagtccagcttcctgctcaaccctaatggc
ttcagcgagggagagctggccacgccccctcgcaaaatacttcacaccatcaggcagctg
aaccctatgtatgaaggctatctccagcatgatgctcaggaggttctgcaatgcatcctg
ggatacattcaggaggcctgtgacactatcagaaaagagcaggagctggagaggaaggag
gaggacgacagcgacgttaaaaaggagactggcgttccctcagattccagtttctctggg
acggaatccagagcttccacggacgaagtcagcggaaagaggaagagcgacacagaggtg
ggaaacgccaagaagaagaccaagtccaagaagtctgagtccactgaagaaaatgtctgt
agaaacaaacccttcactcgctccaagaggaagtcctccagtgatatcacagtggatagc
gctcagagtaaagagggagagcaggaggaggaggagaagaagaatctgaatcctgatgaa
gagaaagatgaaaaagcatccagtaaagagacaagcgggaaaagaaagaagagaggtact
ctgggttggctgagatcatcagggaaacagccgagtattttctcaaagttctgcagcgtc
gggaagatcagctctacaaatccaaaacctcagaacaaatccgagccagagaacagaccg
tcagaggagccaaaacagaaaagcactcaacagtctgtagcaaggaagtcagctacaggt
caaatagagaaacagcaagacgttctgggcctgatggagaaactgttccagggccgactg
gtgctgaggactcgttgtctggagtgtgagagcttcacagagcggagagaggacttccag
gacatcagcgtgccggtgctggacgaccagccgaagagtccagaagatctatctgaagtc
tctccagacccgaagcctgagatgaagaccttgacgtgggccatttctcagtttgcctct
gtggagcgcatcgttggtgaagataaatacttctgtgaaacctgtcatcactacacggag
gctgaaaggagtctgctgtttgacaaaactcctgaagtcatcactattcaccttaagcgc
ttctctgccagcagcttggaggtggatccgtacgcaggcctctctaaagtcaacactccc
ttacagacgcccctcaccttgtctctgaacgagtggtgcacaaagccatcggctgctaca
gggcagcagtatgaactgtttgctgtggtcatgcacagcggtgtcaccatcagcagcggc
cactacaccacctacatccgcatgtccgatctgaaggacgcaaaggtctggctgcaggac
aagaaagaaaaagttactgaggaggatgtaaaagaaagcaaagagggagcacagacagac
gaaaacacaacctttgacgatggcgaggtgtcggtcagcctgagcacaagggggcagcgg
cgagcgggtttagctagcactaaatcagggagcaaaaagcttttggagggaggcgttgga
ctcctggggggacagaggagtttgcccaattgcgacctgggaagcggcagcaaagcagct
aaccgtgacgcagcggagggatctaaacggagaaagacgctaagcagctccagccagaat
gctggcggactcaaaaaggagccggaagatgcgccgatggctccccctggtgggatggag
gcagcagagcagcaagctttaaccagcctgctggagtatgaggggaaatggctgctgttt
gatgactctgaagtgcgtttgtttgtggaggaggacttcctgcgagcctgttctcctgaa
acgtgctcctcatccacaccctacctgctgttctacaaaaggatgcccgagccccgacac
taa
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