Xiphophorus hellerii (green swordtail): 116726480
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Entry
116726480 CDS
T07363
Symbol
hes1
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116726480 (hes1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116726480 (hes1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116726480 (hes1)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116726480 (hes1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116726480 (hes1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
116726480 (hes1)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
116726480
NCBI-ProteinID:
XP_032429119
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Position
9:complement(11497422..11499128)
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AA seq
277 aa
AA seq
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MPADMMEKSSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPSILGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHQHQLPPAAGSTHPSFAQSM
VQIPNSSPQVLPMNPASCKGGSPPASLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNMSTSVPVPAAVSPGAPSANTDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatgatggaaaaatcctcatcctctccggtcgctgcgacgccggcgagc
atgaacacaactcctgacaagcccaagacagcatctgaacacagaaagtcatcaaagccg
atcatggagaagaggagacgagccagaataaacgagagcttgggtcagctaaagactctc
attctggatgcgctcaaaaaagatagctccagacactccaaactggagaaggcagacatc
ctggagatgacagtgaagcacctccggaacctgcagagagctcagatgaccgctgctctg
aacaccgacccctccatattgggaaaatatcgtgcaggattcagtgaatgcatgaatgaa
gtcacccgattcctttccacctgcgagggcgtcaacaccgaagtcaggacgcggctcctg
ggccacttggccagctgcatgacgcagatcaacgccatgaactaccccagccagcatcag
caccagcaccagctccccccagccgccgggtcgacgcacccctccttcgctcagtccatg
gttcagatccccaattcctccccgcaggtgctcccaatgaaccccgcgtcctgtaaaggg
ggctccccgccggccagcttaccgtcagacgcgaccaaagtgtacggcggcttccagatc
gtacctgccacagacggacagttcgctttcctcatacccaacgcggcatttgcgccgaac
ggccccgttatccccgtgtacgcaaacaacatgagcacgtcggtgcctgttcctgccgca
gtgtcccccggagccccatccgccaacacagactcagtgtggcgaccctggtga
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