Xiphophorus hellerii (green swordtail): 116726486
Help
Entry
116726486 CDS
T07363
Symbol
sbno2
Name
(RefSeq) protein strawberry notch homolog 2
KO
K26273
protein strawberry notch
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116726486 (sbno2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116726486 (sbno2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
116726486
NCBI-ProteinID:
XP_032429124
LinkDB
All DBs
Position
9:19936915..19988502
Genome browser
AA seq
1571 aa
AA seq
DB search
MSTLTSVLAMDGENYLHPEGPQLNSSMFSVGASNMESSIFTSSGTWGPFSQQPGYCPMQS
GNQQYHLNNSTTTNIPDMHMSMYPGFSDMDFPSLPKNGNGDFAQDLSCIDDLSNSLFSSP
ADSLSEYADTQSYIPSNHPDPVPTLWDINTSPATTQAQSHLEQNGDRFQGLTSLEDISAI
ISTQALGLQTPVTQPPPEEEEEAEEEEPEELGHVDTYAEYKPSKSTIGISHPDIVVETNT
LSSVPPPDITYTLSIPDSTINSGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGV
GKGRTVAGIILENYLKGRKKALWFSISNDLKYDAERDLKDIDAPNIPVHALNKIKYGDTA
TSEGVLFATYSALIGESQAGGQHRTRIKQILDWCKQDFDGVIIFDECHKAKNATSTKMGK
AVLDLQNKLPHARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHAIEKRGVGA
MEIVAMDMKVSGMYIARQLSFSGVSFRIEEIGLDSDFKEVYNKAAKLWAEALKMFMQAAD
ELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAQKELEAGKCIVIGLQSTGESRT
REVLDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKKGKPRGRQAKMPKH
TVDSGGVINISDDSSSDSEGMDTDSNSSPDSLQDNDDVIFVNHTSHQSARIDEMKHSLLN
KIAVLGKELPLNTLDVLIDRFGGPDKVSEMTGRKGRVVRRPDGTVRYESRAEQGSTIDQI
NIKEKDRFMCGEKLVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWSADRAIQQFGR
THRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENK
YGTKALDKITKSINGYIENKVPPPKGYPEGDAMFFRDMKVGMMDVGIICKEPRFGISTEK
DCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEE
KQETFLTVGNPQDGQVVLYKISVDRGMPWEEAYNRSLKLTGPEEGFYLSHKLRGNSPCVL
LAEQGRGKNFNIYKPNIGKQTQPESLSNLQQRYRKVTFLEARESWENQFTFSFKNCSHAN
WNGKCKKIEEGQECLAGMRLRQYHMLCGALLRVWKRVSDVVSDITSSSILQIVRLKTKQH
NKQVGIKIPENCVARVREELLQMDEEVKRRRKEKEQQERMRKMEQENKHLLENLFSRKPI
QNQTLVHPLVSNPFPKQNLNALQRTQLGSFSQPSSHSPSLFPLNGWPNNSSSLSSPSSAT
NGQVCQSSHRFPPFYGSSSFMSFPQSKNPPLQLTQFSPAPLLSSKNPLDEILDLTVSPPS
SSPDSTTANPAAFVEDFNLDVLLGQTAPDMLTAPQTQLPQLDLQHILQHTSESAATPSSQ
FDLQRPPEPQQEQQTQEQSRDLLVNNHQDILELLCAGLSPPPPAQKAVSSSSALSHYPNP
PSSSSSSSSSSSLYSSAAHSSCFPANSLLPLSDPLPNGQCGVGALDVREALNSMLQAGPD
RKSVIQYRQQD
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccttacctcagtgctggccatggacggggagaactacctgcatccagaaggc
cctcagctgaacagcagcatgttctcagtgggcgcctcaaacatggagagttcaatattt
acctcctctggtacctggggacccttttctcagcagcctggatactgccctatgcaatct
ggaaaccagcaataccacttgaataacagcactaccaccaacattcctgatatgcacatg
agcatgtacccgggattctctgacatggactttcccagcctccctaaaaatgggaatgga
gacttcgcccaggacctgtcctgcattgatgacctctcaaactctttgttctcttctccc
gcggactcgctgtcggagtacgccgacacccagtcctacatcccctccaatcacccggat
ccagttcccacactctgggacattaacactagccccgccaccacacaagcacagagccac
ttagagcaaaatggcgacaggtttcaaggcttgaccagtttggaagatatttctgctata
atcagcacgcaagctttaggactccagactccagtaacacaaccaccaccagaggaagaa
gaggaggctgaggaggaggaaccagaggagctcggccatgttgacacatacgcagagtac
aaaccctcaaaatccacaataggaatttcacatcctgacattgttgtggaaaccaacacg
ctgtccagcgtccctcctccggacatcacatacactctatctattccggactcaactatt
aacagtggcctgctgtctgcactgcagttagaggccattatctacgcctgtcagcaacac
gaggtgattctccagaacaaccagagagcaggcttcctgattggagatggagcaggcgtt
ggaaagggacgcaccgtggcaggaatcattctggagaactatcttaagggacgaaagaaa
gcactgtggttcagcatatccaatgacctgaaatacgacgcagagagagatctcaaagac
atagatgcaccaaatatcccggtgcatgccttaaacaagataaagtatggagacacagct
acctcagaaggagtcctgtttgcaacttactctgcactcatcggagagagccaggcagga
ggccagcaccggacgagaatcaaacagatcctggactggtgcaagcaggactttgatgga
gttattatttttgatgaatgccacaaagccaagaacgccacatccacaaaaatgggcaag
gcagttcttgacctgcagaacaagctgccacacgccagagtggtgtacgccagtgccaca
ggtgcctctgagccaaagaacatgatttatatgagccgcctgggaatctggggcgagggc
acacccttcaggacctttgatgacttcctgcatgccattgagaagagaggggtcggggct
atggagattgtggccatggacatgaaagtgagcggcatgtatattgccagacagctaagc
ttctctggcgtttctttccgcatcgaggagatcggcctggacagcgacttcaaagaggtc
tacaacaaagctgccaagctgtgggcggaggcattgaaaatgttcatgcaggcagctgat
gagctggggctggtcagcaggaagtccctgtggggacagttctggtcatctcaccagcgc
ttcttcaaatacctttgtatcgctgccaaggtgcgctgcctggtggagctggctcagaag
gagctggaggctggaaagtgcatcgttatcggactgcagtccactggagaatcacgcacc
agagaggtcttggatgaaaacgatgggcatcttgacagatttgtttctgcagcagaggga
gtattccagtctcttgtaacaaagcactttccttcagagaaacaaaggagagagaaggca
ccagggaataaaagaaaaaaagggaagcctcgaggtcgccaggcaaagatgcccaagcac
acagtggacagcggcggtgtgatcaacatctctgacgacagcagcagtgactctgagggg
atggacaccgactccaactcttcgccagactccctgcaagacaacgatgacgtcatcttt
gttaaccacactagccaccagtcagctaggatagatgagatgaagcacagcctgctcaat
aaaattgctgtactgggaaaagaactacctctcaacacattggacgtgctcatagatagg
tttggaggaccagataaagtttcagagatgactggacgtaaaggtcgcgtggtgcgacgt
ccagacggcaccgttcgctacgagtcccgggccgagcaaggctccaccatcgaccaaatc
aacatcaaggagaaggaccgcttcatgtgtggagaaaagttggtggccatcatctcagaa
gcagccagctcagggatttccctgcaggccgacaaacgagtgaagaaccagaggcgaagg
gtccacatgaccctggagctgccgtggagtgcagaccgggccatccagcagttcggtcgc
actcaccggtccaatcaggtcacagcaccagagtacatcttcctcatctcagagttggcc
ggggagagacgtttcgcatctattgtggccaaaagactcgagagcctgggtgctttgacc
cacggtgacagaagagccactgaatcgagggacctgagcaagtacaactttgagaacaag
tatggtaccaaggccctggataaaatcaccaaatcaatcaatggctacatagaaaacaag
gtgcctcctcccaaaggataccctgaaggggacgccatgttcttcagagacatgaaagtt
ggaatgatggatgtgggcatcatctgtaaggagcctcgctttggcatcagtactgagaaa
gactgcagcatcaccaagttcctgaaccgcatcctgggcctggaggtccacaagcagaac
tacctcttccagtacttcacagataacttcgactacctgatcgagaaggacaagaaggag
ggaaaatacgacatgggaatcctagatctggcccccggcaatgatgagatttatgaggag
aagcaggaaactttcctgacagtcggaaatcctcaagatggacaggttgttctttataag
atcagcgtggacagaggaatgccgtgggaggaggcgtacaacaggtcactgaagctcacc
ggtcctgaggagggattctacctttcccataagctgcgaggtaacagcccgtgtgtgctg
ctggccgagcagggaagaggtaaaaacttcaacatctacaagcccaacattggcaagcag
acgcagcccgagagcctcagcaacctgcagcaacgttacagaaaggttactttcttggag
gccagggagagctgggagaaccagttcaccttttcctttaagaactgcagccacgccaac
tggaatgggaagtgtaagaaaatcgaggagggccaggagtgtctggcggggatgcgtctc
cgccagtatcacatgctgtgcggagctttgttacgggtgtggaagcgggtctccgacgtt
gtgtccgacatcaccagctccagcattctgcagatcgtccgcctcaaaaccaagcagcac
aacaagcaagtcggcatcaagatcccagaaaactgcgtggcccgcgtgcgcgaggagctg
ctgcagatggacgaggaggtgaaacggaggcggaaagagaaggagcagcaggagcgcatg
cgcaaaatggagcaggagaacaagcaccttctggagaacctgttcagccggaagcccatc
caaaaccagacgctcgttcatcctctggtgtccaacccgttccccaaacagaacctgaac
gctctgcagaggactcagcttggcagcttctcccagccgtcctcccacagcccgtcactg
ttccctctcaacggctggcccaacaactcctcctccttgtcctctccctcctccgccacc
aacggccaggtctgccagtccagtcacagattccccccgttctacggctcgtcgtctttc
atgtctttccctcaatccaagaacccgccgctccagctcacccagttctcgccggctccc
cttctgtcttccaagaaccctctggacgaaatcttggacctgaccgtgagcccgccttct
tcgtctccggacagcaccacggccaacccggccgcgttcgtggaagatttcaacctggac
gttctcttgggccagacggcgccggacatgttgaccgctccgcagacgcagctgccccaa
ctcgacctgcagcacatcctgcagcacacgtcggagtcagcggcgacgccgtccagccag
ttcgacctgcagcgcccgccggagccgcagcaagagcagcagacgcaggagcaaagccgc
gacttgttggtcaacaaccaccaggacatactagagctactttgcgcaggcctgtctccg
cccccgcccgcgcagaaagccgtctcgtcgtcttccgccctgtcccactaccccaatccg
ccctcctcgtcctcatcatcctcctcctcgtcctcgctgtactccagcgcggcacactcc
tcctgctttccggcgaactcgctgctgccgctctcggaccctttacccaacggccagtgc
ggcgtgggcgcgctggacgtccgcgaggctctgaacagcatgctgcaagccggacctgac
cgcaagtccgtcatccagtaccgtcagcaagactga
DBGET
integrated database retrieval system
