Xiphophorus hellerii (green swordtail): 116726491
Help
Entry
116726491 CDS
T07363
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04310
Wnt signaling pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116726491
04330 Notch signaling pathway
116726491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116726491
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
116726491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
WDR55
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
CFAP251_N
ANAPC4_WD40
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_DCAF4
ASA1
NBCH_WD40
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
DUF489
Beta-prop_Vps41
HALZ
TP_0598_N
DUF6100
Motif
Other DBs
NCBI-GeneID:
116726491
NCBI-ProteinID:
XP_032429135
LinkDB
All DBs
Position
9:complement(16161351..16210157)
Genome browser
AA seq
826 aa
AA seq
DB search
MPAAGQKFATHYWLSADCCAVNMNCMYLPSSGVAPLQPPPGSSASVVAAAAAAAAAASGT
PQSLKLTYPETLDRIKEEFQFLQTQYHSLKLECEKLATEKTEIQRHYVMYYEMSYGLNIE
MHKQTEIAKRLNVICAQLIPFLTQEHQQQVVQAMERAKQVTMGELNASIGVRGLPPLPQS
QQLQAQHLSQHAQGLPVGPHPSGLPHPGLTLGGGSGLLALSGALGAQLAAKDERAHLEAA
AAASAAAAEHHRDREAGPSSLSNGDKGRPTDYLSNGKKRKAEEKEFMTDYGSDADKSDDN
LVVDEDPSSPRSVQSYSSRENGLDKIPPSRKEGPPQASPTSLASSSSAPSPSRGKDPPQR
EKSSTPGMKPGTPMSQESNTPGPSGPPQFRPVPGKPGVDPLALGLRNPLAVQGAYPPGAF
GLPPPGVNGDLPGAGGYGAGLHLVSPQMNGAAAAAAAAAAAGYGRSPVASYLLQVGYESP
HSHMRVPGLPASLQSASGKPAYSFHVSADGQMQPVPFPPDALLGPGIPRHARQIHTLSHG
EVVCAVTISTSTRHVYTGGKGCVKVWDISQPGSKSPMAQLDCLNRDNYIRSCKLLSDGRT
LIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDNKVCFSCCSDGNIVVWDLH
NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLG
YCPTGEWLAVGMESSNVEVLHVSKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA
WRTPYGSSIFQSKESSSVLSCDISPDDQFIVTGSGDKKATVYEVIY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagcaggtcaaaaatttgcaacccattactggctatctgcagactgttgtgca
gttaacatgaactgcatgtacctcccctcatcaggagttgcgcctcttcagccacccccg
gggtcttcagcctcagtggtggcggcagcagcggcggcggcagcagcggcctcagggact
ccccagtcactgaaactaacctatccagaaactctggaccgcataaaggaggagtttcag
ttcctgcagacacagtaccacagtttgaaactggagtgtgagaaactggccacggagaag
accgagatccaaagacactacgttatgtattatgaaatgtcctacggccttaacatcgaa
atgcacaaacagacagagattgccaagcggttgaacgtgatatgtgctcagctcatcccc
tttctgacgcaggagcaccagcagcaggtggtccaggccatggagcgcgccaaacaggtg
accatgggggagctaaatgcttcgataggggtacgtgggctcccccctctgcctcagagc
cagcagcttcaggcccagcacctctcccagcacgcccagggtttgccagtcggcccacac
ccatcaggactgccccaccccggtctgacacttggcggagggtccggcctgctggccctg
tccggtgctttgggagcccagcttgcagccaaagatgagagggcacacctggaggcggcg
gcggcagcctccgccgctgcagcagagcaccacagagaccgggaagccggaccaagctcc
ctctccaacggggacaaggggcgcccaacagactacctcagcaacggcaagaagaggaaa
gctgaagagaaggagttcatgacagactatggcagcgatgcggataagagcgatgataat
ttggtggtagatgaggacccatcgtccccccgcagcgtgcagtcgtactcgtcaagggag
aacggtttagacaagatccccccgtcccgtaaggaagggcccccacaggccagccccacc
tccctggcttcatcaagcagcgctccgtccccctcccgaggcaaagatcccccacagaga
gagaaatctagcacccctggtatgaagccggggacccccatgtctcaggagtccaacacc
ccggggccgagtggccccccacagttcagaccggtgccaggaaagcccggcgtcgaccca
cttgctcttggtctaaggaatcccctggcagtgcagggggcctaccctccgggggctttt
ggcctgccccctccgggggtgaacggagatctgcccggggcggggggctacggcgccggc
ctccacctggtctccccccagatgaatggagctgcggcggcggcggctgctgcagctgct
gcgggctacggccggtcccctgtggcatcttatctgctgcaggtgggctacgagtctcca
cactcgcatatgagggtccctgggcttccggccagcctgcagtcggcctcaggaaaaccc
gcctactcgttccacgtgagcgccgacggacagatgcagccggtgccgttcccccccgac
gccctgctgggcccgggcatcccgcgtcatgcccgtcagatccacacgctgagccacggg
gaggtggtgtgcgccgtcacaatcagcacctccacacgccacgtctacaccggaggcaag
ggctgcgtcaaggtgtgggacatcagccagccgggaagcaagagccccatggcccagctg
gactgtctgaaccgggataactacatccgctcctgcaagctgttgtctgatggtcggacc
ctgatcgttggaggtgaggccagcacgctgtccatctgggatctggccacgccgactccc
cgcatcaaggcggagctgacgtcgtccgccccggcctgctacgccctggccatctccccc
gacaacaaggtctgcttctcctgctgcagcgacggcaacatcgtcgtctgggacctgcac
aaccagacgctggtcaggcagttccagggccacacggacggagcgagctgcatcgacatc
tccaacgatggcaccaagctctggacgggagggctggacaacacggtccgctgctgggac
ctgagagagggccggcagctgcagcagcacgacttcacctcacagatcttctccctgggt
tactgtccgacaggcgagtggctggctgtggggatggagagcagcaacgtggaagtgctg
catgtctccaaacccgacaagtaccagctgcacctccacgagagctgcgtcctctccctc
aagttcgcatactgcggtaaatggttcgtgagcacagggaaggataacctcctgaacgcg
tggcggacgccctacggatccagcatattccagtcaaaggagtcttcgtcagttctcagc
tgcgacatctcacctgatgaccagttcatcgtcaccggctctggggacaagaaggccaca
gtctatgaagtcatttactga
DBGET
integrated database retrieval system
