Xiphophorus hellerii (green swordtail): 116726548
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Entry
116726548 CDS
T07363
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116726548 (smc5)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116726548 (smc5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
Rootletin
Nuf2_DHR10-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
116726548
NCBI-ProteinID:
XP_032429212
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Position
1:complement(14813120..14823714)
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AA seq
1073 aa
AA seq
DB search
MAEPGKRQRLSLISSGSQTVSASLSRGPEGAGEAGSFVEGSILRITMKSFLTYDYSVVRP
GPNLNMIVGANGTGKSSIVCAICLVLAGRTVTLGRGDKVGLYVKRGCQKGFVEIELFKNG
GNLVISREIHVENNQSLWMINGGISNQKKVEEEVKALQIQVSNLCQFLPQEKVGEFAKMS
KIELLEATEKSVGPPEMYEYHCELKNFRNKERELENVVKEKASFLEKAKQRNERNKIDVN
RYYEKKRHLDVIELLEKKKPWVEYETARKELEGLKMEREEAKKQLSALRQAQAPMLKKIQ
QIDNQLKPNESQMKAKTAAIKEASVKCKQKQDQLDRKHKEIDDIKQNLRLKQTEEEDHQK
RINNTRLTIEDLKSELAKISDQPDVTPQINAVNMELRRIQVERAKIEGERADLRREGDNI
SAESKMLVRKLKDMNNIMNAKEEKLRGRHKDTHAALQWLRKNRELFEGNVHEPIMLVVNV
KNPEFAKYVESHISFHDLRAFVFQRKDDMEKFMTEVRDKMNLKVNSISAPPESCSKRAPS
RNIESLRRFGFFTYLREMFDAPDEVMSYLCFQYKVHDVPVGNEQTKALIKTVIEEPYLRV
LYTTDERYNVKRSFYSNKISTSNSALHASQYLSITVDAEEKRQVEQQMKACESRLREIDE
QMKALEKEAAALDRKENELLSEKKRLSELKGKRRQLEQKISTKQDSLKQMEQNVVDLKKV
EEETKEKIKAVNFLKVTIATAIVAQMKLRAKLTMEKVHLALEMAGLTAEKNKLENDCRDS
ASEFKTMEQRCSRLEQRKLQLTEQCKGLLKRAKSNCRMQPDEALSEDLRHAFSKLPDTLD
EVDAMLNEERSRAECFTGLSESVVEEYNRREQEIKHLEKELQNKTDSLNAYRQNISEAKE
RWLNPLKQLVEQINDKFSNFFRSMECAGEVDLHSENEEEYDKYGIRIRVKFHSSTQLHEL
TPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACKETT
SQYFFITPKLLQNLQYAEEMTILCIHNGPHMLPPNEWDTTAFILRRRQRKARA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccggtaaaagacagcggcttagcctcatctccagcggctcacaaacggtt
tctgcgagcttatccaggggccccgaaggagcaggagaagctggctcctttgtggagggc
tccatacttcgcatcacgatgaaaagcttcctgacatacgactactctgtggtgcgtcct
gggccgaatctgaacatgattgttggagccaacggaaccggaaagtccagtattgtgtgc
gccatatgcctggttctggctggccggactgtaactctgggcagaggagacaaggttggg
ctttatgtgaaacgtggctgtcaaaaaggttttgttgagatagagctgtttaaaaatgga
ggtaatttggtaattagccgagagatccatgtggagaacaatcagtcgctgtggatgata
aatggtggaatcagcaaccagaaaaaagtggaggaggaggtgaaagctctccagatccaa
gtcagcaacctctgccagtttctacctcaggaaaaagttggagagtttgcaaagatgtcc
aaaattgaacttctcgaggcaactgagaagtcagttgggccaccagaaatgtacgagtac
cactgcgagctcaaaaacttccgcaacaaagagcgagaactggagaatgttgtgaaggag
aaggcgagcttcctagaaaaggccaagcagaggaacgagaggaacaagatcgacgtaaac
cgttattacgaaaagaaaaggcacctggatgtcattgagttgctagaaaagaagaagccg
tgggtggagtatgagaccgcacgtaaggagctggagggcttgaagatggagcgggaagag
gccaaaaagcagctgtctgccctgaggcaggcgcaggcgcccatgttgaagaagatccag
cagattgacaaccagctgaagcccaacgagtcgcaaatgaaggccaagactgcagcaatc
aaagaggcctctgtgaagtgcaaacagaaacaagatcagctggatcggaaacacaaagag
atcgacgacattaaacagaacctgcgactgaagcagaccgaagaggaggaccaccagaag
cggatcaataacaccagactgaccatcgaggacctgaagtcggagctggccaaaatcagt
gaccagccggacgtgacaccacagatcaacgccgtcaacatggagctgaggcgcatccag
gtggagagagcaaagatcgaaggagagagggcggacctgcgcagggagggcgacaacatc
agcgccgagtcgaaaatgttggtaaggaagcttaaggacatgaacaacataatgaacgcc
aaagaagagaagctgcgaggacgccacaaggatacacacgctgccctccagtggctgagg
aagaaccgagagctctttgaaggaaatgtccatgaacccattatgctggtggtgaatgta
aagaatcccgaatttgccaagtatgtggagagccacatctccttccacgacctgcgggcg
ttcgttttccagaggaaggacgacatggaaaagtttatgaccgaggtccgtgacaaaatg
aacttgaaagttaactccatttctgctccaccggagtcgtgttccaagcgggcgccatcc
cgaaacatcgagtccctgagacgttttggcttcttcacttacctccgtgagatgtttgat
gctcctgatgaggtgatgagttacctttgcttccagtacaaggtgcacgatgtgccagtg
ggaaacgaacagaccaaagctctcatcaaaacggtgattgaggagccctaccttagggtg
ttatacacaacagatgagaggtacaatgtaaaaaggtccttctattccaacaagataagc
accagcaactcggctttgcacgcctctcagtacctctcaataaccgtggatgctgaggag
aaacggcaagtggagcagcagatgaaggcctgtgagtcaagactgcgagagattgatgag
caaatgaaggccctggaaaaggaggctgccgctctggatcgcaaagaaaacgaactgtta
tcagagaagaaacgtctctctgagctgaaggggaagaggagacaactggaacagaaaatc
agcacaaaacaggacagtctgaagcagatggagcagaatgttgtcgatctgaaaaaagtt
gaagaggaaactaaagaaaaaattaaggctgtcaatttcctgaaggtcaccatagctaca
gcaatcgtggctcaaatgaagctgagagccaagctgacgatggagaaggtgcatctggct
ttggagatggcggggttaacagcagagaagaacaagctggaaaacgactgcagggacagt
gcctctgaatttaaaaccatggaacaaagatgcagccgtctggagcagaggaagctccag
ctgactgaacagtgcaaaggcctgctgaagagggcgaagtccaactgtcggatgcagcca
gacgaggcgttatcagaagacctgcgccatgctttcagcaaactgcccgacacgctggat
gaggtcgatgccatgctgaacgaggaacgctccagagccgagtgcttcactggtctcagt
gaaagcgttgttgaggagtacaacaggagagagcaggagatcaaacatctggagaaagag
cttcaaaataagacagactccttgaatgcctacaggcagaatatatctgaggcgaaggaa
cgctggctgaaccctctgaagcagctggtggaacagataaatgacaagttcagtaacttc
ttccgctccatggagtgtgcaggagaggtggatttgcactcagagaatgaggaggaatac
gacaagtacgggattcgcattcgtgtgaagttccacagcagcacgcagcttcacgagctc
acgccgcaccatcagagcggaggagagcgcagcgtctccaccatgctttatctgatggcc
ttgcaggagctgaaccgctgccccttcagagtggtggatgagatcaaccagggaatggat
cctgtaaatgaaaggagagtgtttgacattgtggtccggaccgcctgcaaagagacgacg
tctcagtacttcttcatcacgccaaaactgctgcagaatctgcagtacgccgaggagatg
accattctctgcatccataacgggcctcacatgcttcctcccaacgaatgggacacaacg
gctttcatcctacgccgccgccaaagaaaagccagggcataa
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