Xiphophorus hellerii (green swordtail): 116726639
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Entry
116726639 CDS
T07363
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116726639
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116726639
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116726639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-RING_2
Torus
zf-CCCH
zf-C3HC4
zf-rbx1
zf-CCCH_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf_CCCH_4
zf-CCCH_2
zf-RING_11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116726639
NCBI-ProteinID:
XP_032429342
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All DBs
Position
1:complement(14860203..14864511)
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AA seq
352 aa
AA seq
DB search
MDSVRSGNICRRFINGSCRFGRRCKYRHEFTPIPASQICRYFQKGGCWYGERCRFFHVLL
PQVGPVFPGRRGSVPVASPSGMPHYSERRGSEPSLWRFNVPSRHRCSGSQSAIYPFNLQQ
ETGNLPEYVLEELSQENYLESAPSSGIAEASAWQGRYERASKSETCEDGAAAACNEKSEE
TLAFLQSKNVVCGICMDKVYEKENQRDRVFGILPNCNHPFCLDCIATWRKTKDIGLDVVR
ACPQCRVRSAFYVPNKYWVEGQEKETVIGAFKKKFGKKRCCFYDRYGCCPFKKECLYRHV
GDSSNSPVFSYLSEEEDDNFTDLLGFFISMSLLGGEEADEELLFCLTEDYGF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggactcggttcgtagtggaaacatttgtaggcgcttcataaatggctcttgcagattt
ggccgaaggtgcaagtacagacatgagttcacccctatacctgcatcccagatatgtcgg
tactttcagaaaggtggctgctggtatggtgaacggtgcaggttctttcatgtccttctg
cctcaagttggaccagtgtttccaggaagaaggggttcagtgcctgtagcctccccctct
ggtatgccccactactctgaaagaagagggtcagaaccatctctttggcgctttaatgtc
ccatccaggcacagatgcagtggatcacagtcagcaatttatcccttcaatcttcagcaa
gaaactgggaatctgccagaatatgttttggaggaactgtcacaagaaaattatttggag
tcagccccaagttcaggaattgctgaagcaagtgcatggcagggaagatatgagagagcc
tctaaatccgaaacatgtgaagatggagctgcagcagcttgcaatgaaaaaagtgaagaa
actttggctttcctgcagagcaaaaatgtggtctgtgggatctgtatggacaaagtctat
gaaaaggagaatcagagagaccgggtctttgggattttgccaaactgcaatcatcccttt
tgtttagactgcatcgcaacctggaggaaaacaaaagacatcggacttgatgtcgtaagg
gcttgtcctcagtgtcgagtcaggtctgctttttatgtgccaaataaatactgggtggaa
ggtcaagagaaggaaactgtaattggtgctttcaagaaaaaatttggtaagaagagatgc
tgcttctatgaccgatatggatgctgtcccttcaaaaaggagtgtctctatcggcatgtt
ggagattcttctaacagtccagtgttttcatacctctcagaggaagaggatgacaatttt
actgatctgcttggttttttcataagcatgagccttcttggtggtgaagaagcggacgaa
gaacttctcttttgcctcactgaagattacgggttttaa
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