Xiphophorus hellerii (green swordtail): 116726718
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Entry
116726718 CDS
T07363
Symbol
itgb3
Name
(RefSeq) integrin beta-3
KO
K06493
integrin beta 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03266
Virion - Herpesvirus
xhe04081
Hormone signaling
xhe04145
Phagosome
xhe04148
Efferocytosis
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
xhe04810
Regulation of actin cytoskeleton
xhe04820
Cytoskeleton in muscle cells
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116726718 (itgb3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116726718 (itgb3)
04512 ECM-receptor interaction
116726718 (itgb3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116726718 (itgb3)
04148 Efferocytosis
116726718 (itgb3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116726718 (itgb3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116726718 (itgb3)
04810 Regulation of actin cytoskeleton
116726718 (itgb3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116726718 (itgb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116726718 (itgb3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116726718 (itgb3)
04515 Cell adhesion molecules [BR:
xhe04515
]
116726718 (itgb3)
04090 CD molecules [BR:
xhe04090
]
116726718 (itgb3)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116726718 (itgb3)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116726718 (itgb3)
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin beta subunits
116726718 (itgb3)
CD molecules [BR:
xhe04090
]
Proteins
116726718 (itgb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
BNR_6
Motif
Other DBs
NCBI-GeneID:
116726718
NCBI-ProteinID:
XP_032429445
LinkDB
All DBs
Position
10:6345438..6373730
Genome browser
AA seq
792 aa
AA seq
DB search
MAALPTRWLLWMCVFTFAGKTAASGSNVCTSRGASTCKQCLAVHPSCSWCFQEDFGHGVA
SSSRCDLKKNLIAAGCEASGLESPTSRLQVIEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGRGLAEEMNRTTSNLRMGF
GAFVDKPLSPYMYISPEAAVRNPCYSINTTCLPQFGYKHVLSLTEEVSRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVHPNDGQC
HLNADNMYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELLGVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPRQKKKTFIIKPVGFKDSLTITVTFECDCKCQSKAQLNSPKCSNGNG
TYECGMCLCHPGRLGPYCECAEGDYNPMEQDRCSGPAGSGGPVCSGRGDCVCGQCVCHSS
DFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCMSNL
GLLCSGRGQCVCGVCECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLHDDNTC
SRICKDEIVLVDEIVLHDTNAVNCSYKDENDCVEHFQYYEDASGKSILFVVKEPDCPKGP
DILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYKGAT
STFTNITYRGKD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcccaacgcgctggctcttatggatgtgtgttttcacatttgcagggaaa
acggcagcaagcggttcaaacgtgtgcacctccaggggagccagcacatgcaagcaatgt
ctggctgtgcaccccagctgttcttggtgcttccaggaggactttggtcatggagttgcc
agctcgtcacgctgcgacctgaagaaaaacctgatcgctgcgggttgtgaagcatccggt
ctggagtctccgaccagcagactccaagtgatcgaggaccggccgctgagcaacaaggcg
gccggagcgacccaagatgtcacccagataaagccgcagaaactgcatatcactctcagg
ccagatgatgcaaagcgcttcacagtgaaagtgcggcaggtagaagactacccagttgac
ctttactacctcatggacctgtcctactcgatgaacgatgaccttttccgcctgaggacg
ctgggccgcggtctggccgaagaaatgaaccgaaccaccagcaacctgcgcatgggcttc
ggggcttttgtggacaagccgctgtcgccgtacatgtacatctcacctgaggcggccgtg
agaaacccctgctacagcattaataccacctgtctgccccagttcggctacaaacacgtg
ctgtctttgacggaggaagtgagccgcttcacggaggaggtgaagaagcagatggtgtcc
aggaaccgagacgccccggagggaggattcgatgcaatcatccaggctgctgtgtgcaag
gagcagatcggctggcgtccaggtgcttcccacctcctgattttcacctccgatgccaaa
acccatgtggctctggatggacgactcgctggaatcgtgcatcccaacgatggacagtgc
cacctgaacgctgacaatatgtacagcatgtccaccactatggattatccgtcacttgct
ttgatcacagagaaaatgtcagagaacaacatcaacctcatctttgcagtcaccaaccct
gtggtgcccctctaccagaactacagtgagcttattcctggcaccacagtgggaacattg
tccaacgactccggaaacgtcatccagctcatcctaaaagcctacgctaaaattcgctct
aaagtggagctggagcttctaggcgtcccagaggagctgtccttgtcctttaatgccacc
tgtctgaacggagagctcatccccggcctcaaatcctgctccggcctcaaaataggagac
acggtgtcgttcagcgtagaggcccgcgctcgaggctgtcccagacaaaaaaagaagacc
ttcatcatcaaaccagttggcttcaaggactctctcaccatcactgtcacctttgagtgt
gactgtaaatgccagagcaaagcccagctaaacagccccaaatgtagcaacgggaacggt
acctacgagtgcggcatgtgcctgtgccacccaggcaggttggggccgtactgcgagtgc
gcagagggcgactacaaccccatggagcaggaccgctgcagcggcccagcgggatccgga
ggacccgtctgcagcggccgcggcgactgcgtgtgcggccagtgtgtgtgccacagcagc
gacttcggaaaggtgtgggggaagctgtgtgagtgtgatgacttcaactgcctgcgatac
aaaggagagctgtgctcaggccatggagtgtgtaactgcggtttctgccagtgtgcgcca
gactggcagggtgagaactgtaactgctcccgacgcacggacacctgcatgtccaacctg
ggtctgctctgcagcggcaggggccagtgcgtctgtggggtctgcgagtgcacccagccg
ggggcctacggggccacatgtgacaagtgccccacctgcccagacgcttgtaccatgaag
aaggaatgcgtggagtgtaaacatttcaaaaggggaaagctgcatgacgataacacctgc
agtcgaatctgcaaggatgagattgtacttgtggatgaaatagttctccatgacacgaac
gcggtaaactgctcgtataaagacgaaaacgactgcgtggagcatttccagtactatgag
gacgccagcggcaaatccatcctgtttgtggtcaaagagccggactgccccaagggtccg
gacattttggtggtgctcctgtcggtggcgggagccattttgttcctcggcctggccgct
ctgctgatctggaagctgctggttaccatccacgacaggcgggagtttgccaaattcgag
gaggagcgcgctcgggccaagtgggacacggggcacaatcctctttataaaggagcaacg
tctacctttacaaacatcacatacagaggaaaagactga
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