Xiphophorus hellerii (green swordtail): 116726739
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Entry
116726739 CDS
T07363
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04137
Mitophagy - animal
xhe04144
Endocytosis
xhe04145
Phagosome
xhe04148
Efferocytosis
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116726739
04145 Phagosome
116726739
04137 Mitophagy - animal
116726739
04148 Efferocytosis
116726739
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116726739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116726739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116726739
04031 GTP-binding proteins [BR:
xhe04031
]
116726739
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
116726739
Endosome - Lysosome transport
116726739
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116726739
Exosomal proteins of other body fluids (saliva and urine)
116726739
Exosomal proteins of colorectal cancer cells
116726739
Exosomal proteins of bladder cancer cells
116726739
GTP-binding proteins [BR:
xhe04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
116726739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
116726739
NCBI-ProteinID:
XP_032429484
LinkDB
All DBs
Position
10:complement(6805936..6816157)
Genome browser
AA seq
222 aa
AA seq
DB search
MAGRGGGANRPNGAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKEL
QRQASPNIVIALAGNKADIADKRAVEFQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKSEPQGGAGQGGRTRTGVDLQEATPAGRGGGGGCCGGH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgcggcggtggagcaaatcggcctaatggtgctgcggcggcaaacaaaatc
tgccagttcaagctggtgctgctgggggagtcggctgtgggcaagtccagcttagtgctg
cgcttcgttaaaggccagttccacgaattccaggagagcacaatcggagctgcgttcctc
actcagacggtctgtctggacgacaccactgtgaagtttgagatttgggacacagcgggt
caggagcgataccacagcctcgccccaatgtactacagaggcgcacaggcagccatcgtg
gtttacgacatcaccaacacagacacatttgcacgtgcaaaaaactgggtgaaggagctt
cagaggcaagccagtcccaacatcgtgatcgctctggcaggcaacaaggcagacatcgct
gacaagagagcagtggaatttcaggaggcgcaaacatacgctgacgacaatagtctgctc
ttcatggaaacttcagccaagactgcgatgaatgtcaatgaaatttttatggccatcgca
aagaagcttccaaagagcgagcctcagggcggagcaggacaaggcgggcggacaagaacc
ggggtggatctacaagaggcgacccccgcaggccgcggcggcggcggcggctgctgcggc
ggccattag
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