Xiphophorus hellerii (green swordtail): 116726757
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Entry
116726757 CDS
T07363
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G-like isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116726757
04020 Calcium signaling pathway
116726757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116726757
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116726757
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
SieB
Motif
Other DBs
NCBI-GeneID:
116726757
NCBI-ProteinID:
XP_032429506
LinkDB
All DBs
Position
10:complement(20173937..20445385)
Genome browser
AA seq
2571 aa
AA seq
DB search
MAEDGGSVSALPDARGSEGRSSLPRTFIRLNDLSGLATGAVECVGGGGELVMEPGSPAPD
GISVAGDEGSTQGGGESLPYPTLAPVVFFYLKQTTRPRSWCLKMVCNPWFERASMLVILL
NCVTLGMFHPCEDINCDSERCKILQDFDDFIFAFFAIEMVIKMVALGIFGKKCYLGDTWN
RLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGN
VLLLCFFVFFIFGIVGVQLWAGLLRNRCFVKDNFSFPLSVELGKYYHTENDDENPFICSM
PRDNGMRDCGSIPKLYDEAGQQCSLDIDSYNSTDNTTCVNWNQYYTNCSAGLINPFKGAI
NFDNICYAWIAIFQVITLEGWVDIMYFVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIA
TQFSETKQRESQLMKEQRVRFMSNASTLASLSEPGSCYDELLKYLVHIIRKGAKQVAHVC
RFLARRAGLNIASSPPATEPTHSQRQRRRRKSSRQGSMSVHHMVHHHHLHHHYHLGNGSI
REGGSTRCLEGRDVEAGAPKASTSVMPLGLAPPSSLIAATSDSNVAVLGNLTSGAGDSSS
GCGVLRGEPSHCTLFSTNRGMNPVAFLAPTPTSRPMKRNSVPFAAPGPKNYPTLQARALA
ESRRGSVTASTLTNLSYNLNIPPMHLDRRPSSLVDTRTPTAQLSCQLSARELITMDAAGL
TMDPETCPDCAKALAHELEGFTEGNETPGDSDSDCVYELSQDHHHHRDRRDSRQPRKKSR
RLGKTAAKVVHFWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEYHEQPEELTNALE
ISNIVFTSLFSLEMLLKVLVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQGGGLSVLRTF
RLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGSERD
GDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSPVAALYFIALMTFGNYVLF
NLLVAILVEGFQTEEITKREDLHAQLSLIQLPVDSGGDASKTGSEIDSVARSMEDVNGSK
KDLSPSTVVPVNGHVEMKTSLTPPLITHTAATPMPVPKLPVAGDPVLGYESCQGSNISID
PACFDKSPTSVRSSPHGQWTTGSGWGSRRSSWNSLSRVPSYKRQKRQSGERRSLLSGEGN
SSSDEGDGGGEGGGGLVDEDDTSLPRTDSMSQPHGGPRHRRMESVETRSSMDLPPEALLQ
VPYLHRSASMHSSRPPSLAHLRPPEHSDCNGKGTPSALGPTNVSLEENTEDENAEEEVSQ
SRFDRILRWMEKKQPAWCRQRDTWSLYLFPPQSRFRILCNKIITHKMFDHIVLVIIFLNC
ITIAMERPRIHPSSAERIFLTFSNYIFTAIFVAEMTVKIAAMGFFFGDKAYLRSSWNILD
GMLVMISVVDILVSLISNTGTKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLK
PIGNIVVICCAFFIIFGILGVQLFKGKFFVCQGEDVRNITNRTDCEGAHYKWVRHKYNFD
NLGQALMSLFVLASKDGWVDIMYDGLDAVGVDQQPIMNYNPWMLLYFISFLLIVAFFVLN
MFVGVVVENFHKCRRHQEAEEAKRREEKRLKRMEKKRRNLLVPGVSWALSDGTLKEAQSK
PYYSDYSPTRLLIHKMCTSHYLDLFITIVIGLNVITMSMEHYEQPQELDNALKICNYIFT
LIFVLESVFKLVAFGFRRFFKDKWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIM
RVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLICD
ELHPCEGLGRYATFRNFGMAFLLLFRVSTGDNWNGIMKDTLRDCAHETGTCYNTVVSPIY
FVSFVLTAQFVLVNVVIAVLMKHLEESNKEAKEEAELEAELNLELQMEGADMAPRSPQLN
PLALGMDRSSSGGSPWRSAGGGDMVQEREGPMDSPTADITRDSVDIRAEPPAYPEPQLEF
VQRRPLFDSISLVIQGSVEGELSLMDNLSGSICHYYALPPRPNKHSTDKKIPLAEMEALS
LASEKSWSLALPDDSAPGDFSPLFLSALECNPEAPKDNLLSVRKPAVGRTHSLPNDSYMF
FPLQPFGSSSPSPAQLVAQSQGPQHLVGTHRAQSGSRGSVRSQPEECSQQLTVPTDFFRP
ISPHSHSDSESIPRQPPSRRTHALSRTLRRQVAVSTDSQEALCSDERESSEGLLNAAALG
LPLSASPSHQHHHPHLHPALCLVPATPGASPKPSSVHTQQHDQHCLASYSSSALPSTSSH
PPPPPLPARPQQQQQEEVEAASEDREVSLITCGGLVGSDSVAAEDTVCQESRSPCTRQLK
RFHSVDTQGCSTLLPRPRPYSWLDDPRRHSVEVYPAKDPCPQRSAASTSSGFVSRSDSLQ
IPTQAPLPSPRRKKKMSPPCISVDPPDELEPQSGLYPSLSGMGLAGLGMPPPLPSRDTCL
RRRAPSSDSKDSFDLGVGEGLGQDGGSPNPNPSSKLLTLPSFSFEKTSSEH
NT seq
7716 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggatgggggaagtgtctccgcgctccccgatgccaggggctcagagggtcgc
tcctctctgccaaggactttcatccggctgaacgacctgtccgggctggcaacgggagct
gtggagtgtgtcggcggtggcggcgagctggtgatggagccggggtctccggcgcccgac
gggatctctgtggccggggacgagggttcgacgcaaggcggcggggagagcctgccctac
cccacgctggcccccgtggtcttcttctacctgaaacaaaccacgcgcccccggagttgg
tgtctcaaaatggtgtgcaacccatggttcgaacgagcgtccatgttggtgatcctgctg
aactgcgtgacactgggcatgtttcatccctgcgaagacatcaactgtgactctgagcgg
tgcaaaattctacaggactttgatgacttcatcttcgccttcttcgccatcgagatggtg
atcaaaatggtagccctggggatttttggcaagaagtgttacctcggagacacgtggaac
cgcctggatttcttcatcgtattggctgggatgttggagtactcactcaacctgcaaaat
gttagcttttcagctgtgaggacggtgcgtgtgctgagacccctgagagccatcaaccgg
gtgccaagtatgcgcatactggtgaccctgctgctggacacgctgcccatgctgggtaat
gtgctgctgctctgcttctttgtcttcttcatcttcgggatcgttggcgtccagctgtgg
gccggcctgctcagaaaccgctgcttcgtcaaagacaacttctccttccctctgtccgtg
gagctcggcaagtactaccacacggagaacgacgatgagaaccccttcatctgctccatg
ccccgagacaacggcatgagggactgcggctccatccccaagctgtacgacgaggcgggc
cagcagtgcagtctggacatcgactcctacaacagcacagacaacaccacctgcgtcaac
tggaaccagtactacaccaactgctccgccggcctcatcaaccccttcaagggggccatc
aacttcgacaacatctgctatgcgtggatagccatctttcaggtgatcactctggagggc
tgggtggacatcatgtactttgtgatggatgcacactccttctacaacttcatctacttc
atcctgcttatcattatcggctcattcttcatgattaacctgtgcctggtggtcatcgca
actcagttctcagagaccaagcagcgggagagccagctgatgaaggagcagcgagttcgc
ttcatgtccaacgccagcactctggcatccctgtccgaaccaggatcctgctacgatgag
ctgctgaagtacctggtccacatcatccggaagggggccaagcaagtggctcatgtctgc
aggtttttggcccgccgcgcaggacttaacatcgcctcctcgccgccagcaacagagccc
acacatagccagaggcagaggaggagaagaaaatcctccaggcaggggtctatgtcggtt
catcacatggtgcaccatcatcacctccaccatcactaccatcttggcaacggcagcatc
cgggagggagggagcacgaggtgtctggaggggagagacgtggaggctggggctcccaaa
gcaagcacaagcgttatgccactgggcttggcaccgccatcctctctgatagccgcaacc
tccgactcaaacgtcgccgtgttgggaaacctgacttctggagcgggcgactcgtcctcg
ggttgcggcgtgctcagaggagaaccgtctcactgcactttgttttccaccaaccgggga
atgaatccagtggccttcctggctccgactcccacatccagacccatgaagaggaactct
gtaccatttgctgctccagggcctaagaactaccccaccctccaggcccgagccttggca
gagtccaggagagggagtgtcactgccagcacgctaacaaatctgagttataatctcaat
atcccacccatgcatctggacagacggccatccagcctggtggacacacgcactccaaca
gctcagctctcctgccagttgtcggctcgtgagctcatcaccatggatgcagctggtctg
actatggaccctgagacctgccctgattgcgctaaggcactggcccatgagttggagggt
ttcaccgagggcaacgagacgccaggtgactcggacagcgactgtgtgtatgagctatcg
caagaccaccaccaccacagggacaggagagacagccggcagcccaggaagaagagtcgg
aggttgggcaagacggctgccaaggtcgtccacttttggaggctggtgtgtgacaccttc
aggaagattgtggatagcaagtactttggtcgggggattatgatcgccattctgattaac
accttaagcatggggatcgagtaccatgagcagcctgaggagttgaccaacgccctggag
atcagcaacatcgtcttcaccagcctcttctccctggagatgctgctgaaggttttggtg
tacgggccgttcggctacatcaagaacccctacaacatctttgacggcatcatagtggtg
atcagcgtttgggagatcgtcggccagcagggcggcggcctgtccgtgctgagaaccttc
cggctgatgcgcgtcctgaagctggtgcgcttcatgccggccctgcagaggcagctggtg
gtgctgatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctcttcatc
ttcatcttcagcatcctggggatgcatctgttcggctgcaagtttggctctgagagggac
ggagacacgctgccggacaggaaaaacttcgactccctcctttgggccatagtgaccgtg
tttcagatcctgacccaggaggactggaacaaggtgctgtacaacggcatggcctccacg
tctccagtagcggcgctttacttcatcgccctcatgacctttgggaactacgtcctcttc
aacttgctggtggccatcctagtcgaaggcttccagaccgaggaaattaccaagcgggag
gacttgcatgcccagctgagcctaattcaactgcctgtagactcagggggggatgcttct
aaaaccgggtcagagattgattctgttgcacgaagtatggaagacgtcaatggcagcaaa
aaggacttatcgccttcaacagtagtgccggtgaatggtcacgtggaaatgaagaccagt
ctgactccaccgctcatcacccacaccgctgccacgcccatgcccgtccccaagttgccc
gtggcgggcgaccccgtcctgggctacgaatcttgtcaaggcagcaatatctccatcgac
ccagcctgctttgacaaatcgcctactagcgtccgctcctctccgcacggccagtggacg
accggcagcggctggggcagccgacggtccagctggaacagcctgagccgcgtgccatca
tacaagcgtcagaagcgacagtctggcgagcggcggtctctcttgtccggggagggcaac
tcgagctccgacgaaggagacgggggaggagaaggcggaggcgggttggtggacgaagac
gacacgtcccttcctaggacggactcgatgtcgcagcctcacggaggaccgcggcacagg
aggatggagtccgtggaaactcggagctccatggatttgcctcctgaggccttactgcag
gtgccctacctgcaccgctcagccagcatgcacagctccaggccgccctccctggcccac
ctacggcctccagaacacagcgactgcaacgggaagggaactccgtcggccctgggcccg
accaacgtctccctggaggagaacacagaagacgagaacgcggaggaggaggtcagccag
agtcgttttgacaggattctccgatggatggagaaaaagcagccagcatggtgtcggcag
agagacacatggtccctctacctgttccccccacagtccaggttccgaatcctgtgcaac
aagatcatcacccacaagatgtttgaccacatcgttttggtcatcatcttcctcaactgc
atcaccatcgccatggagaggcctcgcatccatcccagcagtgccgagcggatcttcctg
acattctccaactacatcttcaccgcgatcttcgtggcagagatgaccgtaaagattgcg
gccatgggctttttcttcggggacaaagcctacctgaggagcagctggaacatcctggac
gggatgttggtgatgatttctgtcgtcgacatcctggtgtctctcatctccaacacggga
accaaaatcttgggcatgctccgagtgctgcggctgctgaggacgctcaggccgctccgc
gtgatcagccgagctccggggctgaagctggtggtggagacactgatgtcgtcactcaag
cctatcgggaacatcgtcgtcatctgctgtgccttcttcattatctttggcatccttggc
gtccagcttttcaaggggaagttctttgtgtgtcagggggaggatgtgaggaacataacc
aacaggacagactgcgaaggggcccactacaaatgggtccggcacaagtacaacttcgac
aacctggggcaggcattgatgtctctttttgtactggcctcaaaagacggatgggtggat
atcatgtatgatggccttgatgctgtaggagttgatcaacaaccaataatgaactacaac
ccgtggatgctgctctacttcatctccttcctcctgatcgtggccttttttgtgctcaac
atgttcgtgggcgtggtggtggagaacttccacaaatgtcggcgccaccaggaggcagag
gaggccaaacgcagggaggagaagagattgaaacgaatggagaaaaagagacggaattta
ttggttccgggggtgagttgggccctctctgacggcacactgaaagaagctcagagtaag
ccctactactcggattactcccccactcggctactcatccacaagatgtgcaccagccac
tacctggacctcttcatcaccatcgtcatagggctcaacgttatcaccatgtccatggag
cactacgagcagccacaggagcttgacaacgcgttgaagatctgcaactacatcttcacc
ctcatctttgttttggaatctgtcttcaagctggtggcttttggatttcggcgcttcttc
aaggacaagtggaaccagctggatctcgccattgttctgctgtccatcatgggcatcact
ctggaggagattgaggtcaacgcttcgctgcccatcaacccaaccattatccgcatcatg
agagtgctgaggatagcaagagtgctgaagctcctgaagatggcggtcggaatgagagct
ttgctggacacagttatgcaagctctgcctcaggtggggaatctaggcctactcttcatg
ctcctcttcttcatctttgccgcgttgggagtcgagctgtttggcgacttgatctgtgat
gagctccatccgtgtgagggtctgggccgctacgccactttcaggaactttgggatggcg
ttcctgctgctctttagagtttccactggcgacaactggaatggcatcatgaaggacact
ctgagggactgcgcccacgaaacggggacgtgctacaacaccgtggtctctcccatttac
tttgtctccttcgtcctgaccgcccagtttgtcctggtcaacgtggtcatagccgtcctg
atgaagcacttagaggagagcaacaaggaagccaaagaggaggcagagctggaggccgag
ttaaacctggagctgcaaatggaaggagcagacatggcgccaagatcgccccagctcaac
cccctggccctgggcatggatcggtcgagctcagggggttccccctggaggtccgccgga
gggggggacatggtgcaggagcgggaaggtcctatggactctcccactgctgatataacc
agagactctgtagacatcagagcagaaccccccgcatacccagagccccagctggagttt
gtgcagcggagaccgctgtttgactccatctccctggtcatccagggctcagtggaggga
gagttgagtttgatggacaacctgtccggctccatctgccactactacgcgctgcccccc
aggcccaacaagcacagcaccgacaagaagatccctctagcggagatggaagctctgtct
ctggcctcagagaaatcctggtccctagctctgcccgacgactcggcccctggcgatttt
agccccctctttctaagcgctctggaatgcaatccggaggcaccaaaggacaacctgttg
agtgtcagaaaacctgcggtgggacgcactcactccctgcccaacgacagctacatgttc
ttcccccttcagccctttggttcttcgtctccgtctccagcgcagcttgtagcacaatca
caggggccccagcacctagtgggcactcacagggcccaatcaggctccagaggctcggtg
cgctctcagccagaggagtgctcccagcagctgacggtccccactgacttcttcagaccc
atcagcccccacagccactcagactccgagagtattcctcgacaacctccgtcaagacgc
acacatgcacttagccgcacgctccgccgacaggttgcagtgtccactgattctcaggag
gccctctgttcagatgaacgggagagcagtgaaggacttctgaacgcggcagctttgggt
ctacctctatccgcctctccctcccatcagcatcatcatccccatctacacccagctctc
tgcctggtacctgccacaccgggtgcctcccctaaacccagcagcgtgcacacccagcaa
catgaccagcactgcctcgcctcctactcttcttctgcgttaccgtccacgtcctcccac
ccgcctcctcctcccttacctgccaggccccaacagcagcaacaagaggaggtggaggcg
gcgtcggaggatcgtgaagtttctctcatcacctgtggaggactggtgggaagcgacagc
gttgctgcggaggacacggtgtgccaggagagtcggagtccctgcacgaggcagctcaag
aggttccacagcgtcgacacgcaggggtgtagcaccctcctgccccgcccgcgcccttac
tcctggctggacgacccgcggcgccactccgtagaagtgtacccggcgaaggacccttgc
ccacagcgcagtgccgcctccacgtcttcggggtttgtgtcccggtcagacagcctgcag
attcccacccaggccccactgccgtccccccggcgcaagaagaagatgagcccaccctgt
atatccgtcgacccgcctgatgaactcgaaccccagtctggcctctacccaagcctcagt
ggcatggggttggcgggattaggaatgccccctcctctgcccagcagggacacatgtctg
aggaggagagcaccctctagcgactccaaggactcgttcgacctgggagtcggagagggc
ttggggcaagacggaggctcgccgaatcccaatcccagctccaagctattgactcttccc
agcttctccttcgagaagacaagctccgagcactga
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integrated database retrieval system
