Xiphophorus hellerii (green swordtail): 116726849
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Entry
116726849 CDS
T07363
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116726849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116726849
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116726849
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116726849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_10
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
Prok-RING_4
zf-rbx1
zf-RING_11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116726849
NCBI-ProteinID:
XP_032429624
LinkDB
All DBs
Position
1:15223912..15232793
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AA seq
198 aa
AA seq
DB search
MENPANNTKHADSTGDCAICLERIQRKKTLKCQHSFCSECIDSVFRLKPACPICNTFHGV
YTGTQPQGTMTVTHSFLKLPGFENCGSIVIQYSFPGGIQGAEHPNPGVRYSSTSRIAYLP
DCAEGQKVLRLLRKAFDRRLTFTVGRSATTGLNNVITWNDIHHKTSINGGPESFGYPDPA
YLFRVQEELRLKGVTEDA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccggcaaacaacaccaagcacgctgatagcacgggagactgcgccatctgt
ttggagaggattcagaggaagaaaacgctcaagtgtcagcactctttctgctcggagtgc
atcgactcagttttcagactgaagcccgcatgtccgatatgcaacacattccacggagtg
tacacggggacccagccgcagggcacgatgacggtgacccacagctttctgaagctgccg
ggcttcgagaactgcggctcaatcgtcatccagtacagtttcccaggggggatacaaggg
gctgagcacccaaatcccggcgtgaggtacagcagcacctctcgtattgcctacctgcca
gattgtgcagagggacagaaggtcttgaggctgctaaggaaagcattcgaccgaagactt
acttttaccgttggacggtcggccaccacaggcctcaacaatgtcattacctggaacgac
attcaccacaagaccagcataaatggcggtccagagagttttggttatccagatccagcg
tacctgttcagggttcaagaggaacttcgtcttaaaggtgtaacagaggatgcctga
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