Xiphophorus hellerii (green swordtail): 116726878
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Entry
116726878 CDS
T07363
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04382
Cornified envelope formation
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
xhe04518
Integrin signaling
xhe04810
Regulation of actin cytoskeleton
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116726878 (itgb4)
04518 Integrin signaling
116726878 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116726878 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116726878 (itgb4)
04810 Regulation of actin cytoskeleton
116726878 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116726878 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116726878 (itgb4)
04515 Cell adhesion molecules [BR:
xhe04515
]
116726878 (itgb4)
04090 CD molecules [BR:
xhe04090
]
116726878 (itgb4)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116726878 (itgb4)
Exosomal proteins of bladder cancer cells
116726878 (itgb4)
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin beta subunits
116726878 (itgb4)
CD molecules [BR:
xhe04090
]
Proteins
116726878 (itgb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
EGF_2
PSI_integrin
I-EGF_1
EGF_integrin
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
SEA
I-set
Motif
Other DBs
NCBI-GeneID:
116726878
NCBI-ProteinID:
XP_032429701
LinkDB
All DBs
Position
10:19816282..19844882
Genome browser
AA seq
1993 aa
AA seq
DB search
MGSWSLRCLAGLGLLAVLLTCCSAEVNSCLDARSGSCSDCLQAGVGCAYCSEEDFGFPRC
DLHEKILAHGCNAAYVIKATSKHTIERNEAINMNLQRSQVSPQQVSMTFLPGETKVLDVN
VFAPTKGPLDLYILMDFSNSMKDDLDNLKKMGNKLATVVQEISSDYTIGFGKFVDKVIEP
QTDMRPDKLKQPWPDSDSPFSFKNVIPLINNVDSFTTELQKERISGNLDAPEGGFDAILQ
AAVCKEIGWRDGSTHLLVFSTESAFHYEADGANVLAGILPRNDELCHLDENGDYIQATKQ
DYPSIPTLVRLLGKHNIIPIFAVTNYSYMYYSKLKEYFPIAEIGVLQEDSSNILDIMRDA
FVSIQSKMSIRAENRPKAFAAQFLDTSNKVVNYGAFNVKPGEIGKFKVKLTAQQMLEEQP
VCKVDPEDKEGTIKVKPTTFSAAVNVKASILCETCDCEKTPTLKASRCHGNGKLVCGKCL
CDDGWAGAFCNCSKNSGLSKDQCIGPGVTESCSGRGDCQACGTCVCYNPDQYEGPYCQYD
KTQCQRVAGILCNDRGSCVMGRCACSEGWEGAACECSKSNDTCLDNKGNICGGRGKCVCG
SCQCPNSGIPLTATCEPNFEFLLGGCEETRRCVQCKAWETGEKKDKAECDKCPFKVIMVD
ELKERGKVLDYCSFLDEDNDCTYEYTVDTSKDPTNTELLVEVLKKRDCPAASLLWLLPLI
LFLLLLLALLLLCCWKYCACCTSCWQSCLALLPCCGGGRMVGFKEDEYLLRQSQLTSNHL
NTPMVRTGPPKGTDVVRWKVKDNVHRAPNHPRELMQPSLDEMIQFPISLRLNRLFSENLS
RPESKDAEQLRQEVADNLNEVYKQIPEAQKVQQTLFRLQKNAGKRGDYTIMDTVLSAPRR
AYPDIVKLTEKNVQSGNFGDLKVVPGYYTVATDREAAGAVEFQEGVELVDVHVPLFVKDD
DDDKKQLKVEARDVPLGIAKIVKPFVNITIIKEHATSVFSFLQPKYTYSRKDGVAQIPIS
REIIEDGRTQVTYNTQDLTAKNKKDYMSVQGDLSYAPGETQKIVPVRLLELSEKDGFLED
KPIKQFVMDLSNPRQGAKLGRYPRTTVTIADVLEPSVMMFKKGNHNFSTLDQTYPIPVVR
SHNEDSPATVKWRTKAPKSQGFDLSGSLKFAPGETEKHIVIKPVPGSAQPETFQVELYDP
STNGVVGERKNTVVNITEEPRSPEVAQMQSKGYISPRSTAPGGRLLSPGNLKAKATGPRN
IHLNWDPPPGNPVGYKVKYWIFGDPEKEAQVLDVRKPQAELTNLLPFCDYETRVCAYNSM
GEGPDTDIVSCQTLEDAPGEPGRLAFNVISPTVTQVSWAEPAETNGDITAYEVIYTPIDD
EMKPVGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAQNSVGWGPFRDATINLASQPSR
PMSIPIIPDVPIVDAEAGEEYDSYLMYSNDVLKSPTSSKTPSVSGDGWQHIKLVGSNLEL
RQVSWKQRVEVIPSRLSTDTEMSSDEKPHPSYSHTPLPDYMSNGRWEQSFLFPGGSTTRN
LSTSSSPMSTLSSNYKGGAGGSFTTETHTTYMTGPGSPRRQDMIRGGIHTTEVLMRKRSE
NRGYTDENIRDSIVIGDDKFPDLTPSGGFGYAGLQSSSQTQYSYSLSQGSRARTQSPEVN
EALYSLDRVLHDARLSPGVPETPSRLVFSALAPTALKVSWQEPRCEKDILGYCVLYQLLN
GGETKRLNVTNPAENSVVIHDLLPNHSYLFKVKAQSQEGWGPEREGVITIESAVDPKSPL
SPMPGSPFTLSTPSAPGPLVFTALSPDSLQLTWEKPRKPIGDILSYRVTCEQLHGGGDMR
SFNVGGNNAETSLTVPNLTENVPYKFKVQAQTTQGFGPEREGIITIESQDGGALSQYNSQ
SVSRREVFQMPAEMTTRTNVSHTMINDPYFSDGMMMTQLTETGGMVSRQVTREVVQRSVT
GASTVTKRMFYES
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atggggagctggtcgttacgttgcttggctggactcggcctgctggccgtcctgctgacc
tgctgctctgctgaagtgaactcctgcctcgacgcccggtccggttcctgctcagactgt
ctgcaggccggggtgggatgtgcatactgcagcgaagaggactttggctttcctcgctgt
gacctgcatgagaaaatcctcgctcacggctgcaacgctgcatatgtcatcaaagctacc
agcaaacataccatagagcgaaacgaagccattaacatgaaccttcagcggtctcaggtg
tcgccacagcaagtgagcatgaccttcctgcctggagagaccaaagtgctggacgtgaat
gtgtttgctccaactaaaggcccgttggatctttacattctcatggacttctcaaactcc
atgaaggacgatttggacaacttgaagaaaatgggcaacaagctggccacggtggtgcaa
gaaatttcaagtgactacaccattgggtttggaaaatttgtggacaaagtaattgagccc
cagactgacatgagacctgacaaactcaaacagccgtggcctgacagcgactctccgttc
tctttcaaaaatgtcatccctctgatcaacaatgtagacagcttcacaacggagctccaa
aaggagagaatatctggcaacctggacgcccccgaaggaggatttgatgccattctgcag
gcagcagtgtgtaaggagatcggctggcgcgatggcagcactcacctcttggttttctcc
accgagtcagcctttcactacgaggccgacggcgccaacgtgctggcgggaatcctgccg
cgcaacgacgagctttgtcacctggacgaaaacggcgattatattcaggctacaaagcag
gattacccttcgatacccacgctggtccgtctgctgggaaaacacaacatcatccccata
ttcgccgtcaccaactactcctacatgtactacagtaaattgaaagaatatttccccatt
gctgagatcggtgtgcttcaagaggattcatccaacatcttggacatcatgcgggatgcc
tttgtgagtatccagtctaagatgagcatccgtgcggaaaacagacctaaggcttttgca
gctcagtttctggacacaagtaataaagtagtcaattatggagcctttaacgtcaagcct
ggagaaattggcaagttcaaggtaaaactcacagcccaacaaatgctcgaagaacaacct
gtctgcaaagtggatccagaagacaaggaaggcacaatcaaagtaaaaccgacgaccttc
agtgccgctgtcaatgtgaaagcctccattctgtgtgaaacctgtgactgtgagaagaca
cccactctaaaagctagtaggtgccatggcaacggaaagctggtgtgtggaaagtgtctc
tgtgacgatggctgggcgggcgccttctgcaactgctcaaaaaactccggcttgagcaag
gaccagtgcattgggcctggcgtgacagagtcctgctcgggccgtggagactgtcaggca
tgtgggacctgcgtgtgctacaatccggaccagtacgaaggaccctactgccagtacgac
aagacccagtgtcaacgagtcgcaggcatcctttgcaacgatcgcggctcttgcgtgatg
ggtcgctgtgcttgttcagagggctgggagggagctgcctgcgagtgctccaaaagcaac
gacacctgcctggacaacaaagggaatatttgtggtggccgaggcaaatgcgtctgcggc
agctgtcagtgcccaaactccgggattccgttgactgcgacctgtgagccaaacttcgag
ttcttactgggtggatgtgaggagacaaggaggtgcgtccaatgtaaagcatgggagacg
ggcgaaaagaaggacaaagcagagtgcgacaagtgtccctttaaagttatcatggtggat
gagctgaaagaacgggggaaagtgctcgactattgcagtttcctcgatgaggacaacgac
tgcacatacgagtacacggttgacaccagtaaagatccaacaaatactgagctgctggtt
gaggtgctcaaaaagagagactgtccagcagctagtctgctgtggctgctgccgctcatc
cttttcctcctgttgctgctggcgctgctgctgctctgctgctggaagtactgtgcctgc
tgcacatcctgctggcagagctgtcttgccttgttgccgtgctgcgggggaggtcgcatg
gttggctttaaggaagatgagtatttgctccgtcagtctcagctgacctcaaaccacttg
aacacgccgatggtgaggacaggtccaccgaaaggaaccgacgtggttcgctggaaggtc
aaagataacgtgcaccgtgcgcccaatcacccgcgggagctgatgcaaccaagcctggat
gaaatgatccagttcccgatctccctccgactaaacaggttgttctctgagaacctgtct
cgccccgaatcaaaagacgctgagcaactccgtcaagaagtggctgataacttgaacgag
gtgtacaagcagattcctgaggcacagaaagtgcaacaaactttattcagactgcagaaa
aatgctggaaaaaggggggactacaccatcatggacactgtgctgtcagctcctcggaga
gcctacccagacatagtgaaacttaccgagaagaacgtccagtccggaaactttggggac
ctcaaagtggtcccaggctactacactgtagccacagacagagaggctgcgggagccgtg
gagttccaggagggcgtggagttggtggacgttcacgtgccgctgtttgtcaaggacgac
gacgatgacaagaagcagttaaaagtggaggccagggatgtgccgctgggcattgcaaag
attgtgaagccttttgttaacataaccatcatcaaagagcacgctacaagcgtcttctcc
ttcctccaaccgaaatacacgtacagcagaaaggatggtgtggcacaaatccccatcagc
agagagatcatcgaggatggacgcacacaggtcacctacaacactcaagatctcactgcc
aagaataagaaggactacatgagtgtacaaggagacttgtcctacgctccgggtgagact
caaaagatcgttcctgtccgtttgctcgagctgagtgaaaaagatggcttcttggaagac
aaacccatcaagcagtttgttatggacctcagtaacccacgccagggtgccaagctggga
cgatacccaagaaccacggtcaccattgcagacgtactagaaccgagtgtgatgatgttc
aagaaaggtaaccataacttcagcaccttagatcagacctaccccatcccagtggtgcgc
tcccacaacgaagacagccccgccacagtcaaatggcgcaccaaggcaccaaagtcccaa
ggctttgatctgtccggttctctgaagttcgctccgggagaaacggagaagcacatagta
atcaaacccgtccccggctcggcccagccagaaaccttccaggtggagctgtacgatccc
agcaccaatggtgttgttggtgaaaggaagaacaccgttgtgaatatcacagaagaacca
agatctccagaagttgctcagatgcagtcgaagggctacataagcccgagaagcaccgcc
cctggcggtcgcctcctctccccgggaaacctcaaggccaaggcaacgggtcccagaaac
atccatctgaactgggatccgccgccgggcaacccggtgggatacaaggtgaagtattgg
atcttcggcgaccctgagaaagaggcccaggtccttgacgtgaggaagcctcaagccgag
ctgactaatctgttacccttctgcgactacgagacacgagtttgtgcctacaactcaatg
ggagaaggccctgataccgacatcgttagctgtcaaacactggaagacgcgcccggtgag
cctggccgtctggccttcaacgtcatcagtccaaccgtcactcaggtcagctgggcggag
cctgcagagaccaacggcgacatcacagcttacgaggtcatctacacgcccatcgatgat
gaaatgaaaccagtcggagcagccaaaaaagtaaagatcgacaacccaaagaaacgaatg
ctgttgatagaaaacctccagagcgcccagacttatcagtacaaagtccgtgcccaaaac
agcgtaggctggggccccttcagagacgctaccatcaacttggcatcacagcccagcaga
cctatgtccattcccatcattccagatgttcctattgtggacgctgaggcaggagaggaa
tatgacagctacctgatgtacagcaacgatgtgctgaaatcgccaacaagctccaagacg
ccaagcgtttctggtgatggctggcaacatatcaagctggtggggtccaacctggaactc
cgtcaggtgtcatggaaacagcgagtggaggtcatccccagtcgcctcagcacagacaca
gagatgagctcagacgagaagccccaccccagctactcccacacgcccctgccagattac
atgtcgaacggcaggtgggagcagagcttccttttcccaggaggctcaacaacccgcaac
ctttcaacatcatcctctcccatgtccactctgagctccaactacaaaggtggagctggc
ggctccttcaccacagagacgcacaccacctacatgactgggccaggaagcccccgcaga
caggacatgattagaggggggatccacacaaccgaagtcctgatgaggaagcgctcagag
aacagaggatacacagatgaaaatattcgggactccatcgtcataggagacgataagttc
ccagatctgacgccatcaggtgggtttggctacgctggcttgcagagcagctctcagacc
cagtacagctacagcctgtctcagggctccagggccaggactcagtcgccagaggtcaat
gaagccctatacagcctggacagagtgctccatgatgcccgcctctctcctggcgtccca
gaaacgcccagcaggctggtgttttccgccttggcaccgaccgcacttaaagtcagctgg
caggagccacgctgtgagaaagacatcctgggatactgcgttctctaccagctgctcaac
ggaggagagacgaagcgcctcaatgtgacaaatccggccgagaactctgtggtcatccac
gacctgctgcccaaccactcctacctgtttaaggtgaaggctcagagtcaggagggctgg
ggtccagaacgggagggagtcatcaccatcgagtcagctgtggaccccaagagtcccctc
agtcccatgccaggctcgccgttcaccctgagtacccccagcgctccgggcccgctggtg
ttcacagctctgagccccgactcactgcagctcacctgggaaaaaccacggaagcccatc
ggggacatcttgagctacagggtcacctgcgaacagctacatggtggaggcgacatgcgg
tccttcaatgtaggcggtaacaacgccgagaccagtctgactgtcccgaacctgaccgag
aacgtcccgtacaagttcaaggttcaggctcaaaccacgcagggttttggtcccgagaga
gagggcatcatcaccatcgagtctcaggacggaggtgccttgtctcagtacaacagccaa
tcagtgtcgaggagggaggttttccaaatgcctgcagaaatgaccacaagaacaaacgtc
tcccacaccatgatcaacgatccctacttctcagacgggatgatgatgactcagctcacg
gagacgggcggcatggtgagccgtcaggtcactcgggaagtggtccagaggagcgtcacg
ggagcatccaccgtcacaaagagaatgttttatgagtcttag
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integrated database retrieval system
