Xiphophorus hellerii (green swordtail): 116726893
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Entry
116726893 CDS
T07363
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein isoform X1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116726893 (bbs1)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
BBSome
116726893 (bbs1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Beta-prop_LRRK2
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
116726893
NCBI-ProteinID:
XP_032429729
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Position
10:complement(25651158..25671289)
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AA seq
583 aa
AA seq
DB search
MSSVDSSGDGGKWLDAHYDPVAGLYTFSSCIDLADLSGDRESRLVVGDLGTGSSGMKLKV
YRGTALISENSLLDLPAGLVAFFMDLHEPRIPAVAVASGPCIYVYKNLRPYFKFTLPSLD
INPLEQDVWQQAREGQIDPVMLKEMLESIRKKADVPLSMRSLRFLSLESDEVDEFVQLYK
QQPIRRQTVITCIGTLKKSTADEDGISCLVIGTENSDVFVLDPEAFTILCKMSLPSVPTM
MDVTGQFDVEFRITVACRNGSIYILRRESEKPKYCIELLSHPVGLVRVGKNMVVGCTDES
LQGFTQKGKKLWKIILPAPVTTMAAMDLPTRGLQAVLVGLANCQVHLYRDKNLLSTIKTP
DTVTSICFGRYGREDGTLIMTTKGGGLMVKILKRTAVFDDMDSTPGPPLAQSVRLNVPKK
TKLYVDQTLRERENGLAMHRAFHMDLSRMRVAAARAYVKALESSLTPMSSSLSEPLKMNA
VVQGLGPSFKLTLNIQNTASCRPIMNLAINFLYDDNLYRIRNPYMKIPLLVPGLIYPVET
FVECTSDKGISDIIKVFVLHEEKSSPLLTAHINMPVSEGLVLS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtggattccagtggggatggggggaagtggctggatgcccactacgacccg
gtggctggtctctacaccttctcgtcctgcatagacctggcagatcttagcggggacagg
gagagccgactcgtggtcggggacctgggcaccggctcatcaggcatgaagcttaaggtc
taccgtggcacggcactcataagtgagaatagcctgctggacctacctgctggcctggtc
gcctttttcatggacctgcatgagccccgtatccccgccgtggccgtggcctctggacca
tgcatctatgtctacaaaaacctgcggccatacttcaagttcacacttccgagcctggac
atcaacccactggagcaggatgtgtggcagcaggcgagggagggtcaaatcgaccctgtg
atgctgaaggagatgctggaaagtatcaggaagaaggcagacgtcccgctatccatgcga
tctctcaggttcctgtctctggagtctgatgaggtggacgagtttgttcagctgtacaaa
cagcagccaatcaggcggcagacggtcatcacctgcatcggaactctgaagaagagcaca
gccgacgaggacgggattagctgtttggtgattggtacagagaacagcgacgtcttcgtc
cttgaccctgaagctttcaccattctctgcaagatgtctcttccctctgttcccaccatg
atggacgtcacaggtcagtttgatgtggaattccgcatcacagttgcatgtcgcaatggc
agcatctacatcctgcgcagggaatcagagaaaccaaagtactgcatcgagttgttgtct
catcctgttgggctggtgagagttgggaagaacatggttgtaggatgcactgatgagagt
ctacagggtttcacacagaagggtaagaagttgtggaagatcatcttgccggctcctgtc
actacaatggctgccatggacctccccaccaggggccttcaggctgtcctggtgggcctg
gcaaactgtcaggtccatctgtacagggataagaatctgcttagtaccatcaagaccccc
gatacagtcaccagcatctgctttggtcggtacggacgtgaggatgggacccttataatg
accacaaagggaggcggcctcatggttaagatcctgaaaaggacggcggtgtttgatgat
atggacagcactcctggcccgccattggctcagagtgtccgcctcaatgtccctaagaaa
accaagctgtatgtggaccagacactgcgggaacgggagaatggcctggcaatgcaccga
gccttccacatggacctgagccgcatgagagtggctgctgccagagcctatgtcaaagct
ctggagtccagcctgactcctatgtcctccagcctctcagagcccctgaagatgaacgcc
gtggtccagggcctgggcccatcctttaaactgaccctgaatatccagaatacagcgtcc
tgtcggcccatcatgaacctggccatcaacttcctttacgacgacaacctgtatcggatc
aggaacccatacatgaagatcccactgctggtgccgggacttatttaccctgttgagacc
tttgtggagtgtaccagcgacaagggaatctctgacatcatcaaggtgtttgtgttgcac
gaagagaagagctctcctctgctgacggctcacatcaacatgccggtcagtgagggtctg
gtgctcagctaa
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