KEGG   Xiphophorus hellerii (green swordtail): 116726922
Entry
116726922         CDS       T07363                                 
Name
(RefSeq) protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116726922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xhe04131]
    116726922
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xhe02044]
    116726922
Membrane trafficking [BR:xhe04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    116726922
Secretion system [BR:xhe02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   116726922
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 Beta-prop_EML Beta-prop_TEP1_2nd WDR55 TPR_Sec16 EIF3I Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR11_1st Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Nucleoporin_N Prp18 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 116726922
NCBI-ProteinID: XP_032429764
LinkDB
Position
10:7823496..7838725
AA seq 1208 aa
MRLKEIQRTAHQAWSPAGHHPIYLALGTSAQQLDASFNTTAAIEIFEMDFADPSLEMQLK
GSLPTTNRLHSIVWVNFGTAEDGTGGRLVGGSENGTLTVYNPEAIISSGAEAVVGESDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSSPMTPGAKTQPVEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRQPVI
QMWDLRFATSPLKVLENHKRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDVQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTADMISSSFDTMDPFGT
GQVLPPLQVPQPSVQETIIPPLKKPPKWVRRPVGASFGFGGKLITFENSKLPLVQSPQPV
PRQVFVSQVTTETEFLQRSRELQAALKSGSFNNYCQAKIQNATSDAEQDIWKFLLVNFED
EARIKFLKLLGFSKDELERKISKCLGKNFQSNGHGVDAKDLAEKMQRLTTERSDEAAADA
RTSGSISPADFFSHTPKENSTFQIPVSCDTDGLISQALLVGNFEGAVDLCLNDGRYAEAI
LLSISGGEDLLKKTQQKYLRRQKSSISMLISSVVTQNWRDIVQNCELDNWKEALAALLTY
AHPEDFACFCDTLGNRLEHEGTEKRCLQACLCYICSGNIEKLVECWALHRDCSSPLGLED
LVEKVMMLRKSIERLRNSEVAVQSPVLAEKLTCYAGILAAEGNLSTAMTYLPDNSDQPGI
RMLRDRLYHAQGETAAQQQPPSSFNRVGVPTANPTPAAQPPAPKAPIMSQFQPSAPPQVP
SQQQPPMPSIFTPQVPLPNPGPGLPSSTHAHPPSSTRPVVRPSYPQHPATAPAFSSHQPF
QPQPVSSGGPFSPTGPPMPAANLAGPPLPPSSSTAGGLPPTPSPGVPPMGFVLSTSLPSG
MTPPSSQPGAPGPVFPGSFHSQGPAPPMASSSFPPIGAGYPQGGPGAPAAKPFPAPVVAP
PPTGPHDGWNDPPAVRTGPRKKKLPDNYTPPAPITAPVMGFPVEAPQPHNHTQVPPGAPQ
EPNVQLLQQLPAERVEQKEIPSEHMVLKTTFDSLVQRCQLAAGDPQTKRKLDDAGKRLGH
LYDKLREQSLSHNILGGLHEISRCVASQNYQRGLEIHTQVVSSSNFSEISAFMPILKVLM
TIANKLGV
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgaggctgaaggaaattcagaggactgcccaccaggcatggagtcctgccggacaccat
ccgatctacctggccttaggaacatcagcacaacagcttgatgcttctttcaataccaca
gctgccatagagatatttgagatggattttgctgacccctctctggagatgcagctcaag
ggttcattacccaccacaaacaggttgcacagcattgtatgggtaaatttcgggacggcg
gaagatggaactggagggagactcgttggtggaagcgaaaatggcacattgacagtatat
aacccagaggctattataagttctggagcagaggcagtcgttggggagtctgacaaacac
acaggaccagtccgtgcacttgatttcaacccgttccagagtaatcttcttgcctctgga
gcgaatgactctgagatctacatctgggatctaaataacttcagcagcccaatgactcca
ggagcaaaaacacagcccgttgaagacatcagtgttgtgtcgtggaacaggcaggttcag
cacatcctggcttctgctaaccccagtgggaaagcggttgtgtgggacttgaggaagaat
gagcccatcataaagatcagtgatcacagcaacaggatgcactgttcgggaatgctgtgg
caccctgacgtggccacccagctggtgttggcctcagaagatgaccgacagccagtcatc
cagatgtgggaccttcgctttgctacgtcaccccttaaagtgctggaaaatcacaaacga
ggaattctgtccatttcatggagccaggctgattcggagctcctcctgagtagcgctaaa
gacaataggatcctctgctggaatccaaacactggagaggtaatttatgagcttccaact
acaaaccagtggtgctttgatgtccagtggtgccccaggaatccggcccttctttcagca
gcgtcgtttgatgggagaataacagtttactctgtgatgggagggagcttgaaggctcag
caacaaagcacagctgacatgatatcctcttcatttgataccatggatccctttggtacg
ggacaagtgctgcctcctctacaagttcctcagcccagtgtgcaggaaaccatcattcct
cctctgaagaagccacctaaatgggtgcgcaggccagtgggagcttcctttgggtttggt
ggaaagctgataacctttgagaactcaaagcttcctctggtgcaaagcccccagcctgtc
cccagacaagtgtttgtgagccaggttaccacagagacagagttcctccagcgctccagg
gaacttcaggcggcgctgaagtcgggttccttcaacaactactgccaggccaagattcag
aacgccacgtcggatgcagaacaagacatatggaaattccttctggtcaactttgaggac
gaggcccgtattaaattccttaaacttttgggtttcagcaaagatgaattggagagaaag
atttcaaaatgtctggggaagaattttcaatccaacggccatggagttgatgccaaagat
cttgcagagaagatgcagcgtctcacaactgagagatcagatgaagctgcagctgatgct
agaacctcagggtccatttcaccagcagacttcttcagtcacactccaaaggaaaattcc
accttccaaatccctgtatcatgtgacactgacggtttgataagccaggcgctgctggtt
ggcaactttgagggagccgtggatttgtgtctcaatgatggtcgctatgctgaggccatt
ttgctatccatcagcggtggagaggatcttctcaagaagacacagcagaaatacctaaga
aggcaaaaaagcagcatatcaatgcttatatcatcagtggtgacccagaactggagggac
atcgtgcagaactgtgagttggacaactggaaggaagctcttgctgctctgctgacttac
gctcaccctgaagactttgcttgtttttgcgataccttgggaaaccggctagagcacgag
ggcacagagaagcgctgcctgcaagcctgtttgtgttacatctgctctgggaacattgaa
aagctggtggagtgttgggccttgcacagagactgctcttcccctcttgggctagaggat
ctggttgaaaaagtaatgatgctacggaagtcgattgagcgcctccgcaacagtgaggtg
gcagtgcagagccctgtgctggctgagaagctgacctgctacgctggcatcctggctgca
gagggcaatttatccactgccatgacatacctgcctgacaactcagaccaacctggcatc
aggatgctgagagaccggctgtaccatgctcagggagagactgctgcccaacagcaacct
ccaagctccttcaacagggtcggcgtgccaacagctaaccccactcctgcagctcagcct
cctgcaccaaaagcaccaatcatgagtcagttccagccatctgctccaccacaggttcct
tcacaacagcagcctccaatgccatcaatatttactcctcaagttcctctacccaaccca
ggcccaggtctgccatcatccactcatgcacatccgcccagttccacccgcccagttgta
aggccttcctatccgcaacatcctgctacagctccagctttctcttctcatcagccattc
cagcctcagcccgtttccagtggtggtcccttctctcccactggcccgccaatgccagct
gcaaacctagcagggcctccactgccaccttcatcctccaccgctggaggcctgcccccc
actccaagccctggggtgccccctatgggatttgtactgtctacctctttaccttcaggc
atgacgccgcccagctcgcaaccaggagcaccaggtccagttttcccaggcagcttccac
agccaaggcccagcaccccccatggcatctagttccttccctcctattggagctggatat
ccccaaggaggccctggagctcctgcagcaaagcccttcccagcccctgtagttgctccc
cctcctacaggaccacatgatggctggaatgatccaccagcagtacgcactggacccagg
aagaagaagctccctgataactacactccaccagcccccatcactgctcctgtgatgggt
ttcccagtggaggccccacagccacacaaccacacccaagtcccacctggagcccctcag
gagccaaacgtacagctcctccagcagctgccagcagagagagtggagcagaaagagatc
ccatcggagcacatggtcctcaaaaccacctttgacagtttggtgcagcgctgccagctc
gctgcaggagatcctcaaacaaaaaggaagcttgatgatgctggaaagcgtttgggacac
ttgtatgacaagctgagagagcagtcgctctctcacaacattctgggtggactccatgaa
atcagccgctgcgtggcgagccaaaactaccagcggggcctggagatccacactcaggtg
gtcagcagcagcaacttcagcgagatctctgccttcatgcccatcctcaaagtgctcatg
accatcgccaacaagctgggcgtctaa

DBGET integrated database retrieval system