Xiphophorus hellerii (green swordtail): 116726971
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Entry
116726971 CDS
T07363
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116726971
04081 Hormone signaling
116726971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116726971
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116726971
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116726971
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
116726971
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116726971
NCBI-ProteinID:
XP_032429846
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Position
10:complement(14663886..14797372)
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AA seq
409 aa
AA seq
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MEHMPKEQDSNPSEGEEKQWLNGPKRKRKNSQCSVKSMTGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCIIDKITRNQCQLCRFKKCISVGMA
MDLVLDDSKRVAKRRLIEENREKRKKEEMVKSLQTRPEPTVAEWDLIRLVTEAHRHTNAQ
GAQWKQNRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAIRYDPESETLTLSGEIAVKREQLKNGGLGVVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTSVEKIEKCQETYLLAFEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEEQEV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccaaggagcaggactctaacccatcagagggagaagagaaacagtgg
ctcaatggccctaagaggaagaggaagaacagccaatgttcggtgaagagtatgactggg
tacatccccagctacctcgaaaaggatgagccatgtgtggtgtgtggcgacaaggccaca
gggtaccactaccgctgcattacctgcgagggctgcaagggtttctttcgtaggaccatt
caaaagaacctccaccccacctactcctgcaagtacgatggctgctgcatcattgacaag
atcacccgcaaccagtgccagctgtgtcgctttaagaagtgcatctcagtgggaatggcc
atggacttggtcctggatgactcaaagcgggtggctaaacggcgccttattgaggagaac
agggagaaacgcaaaaaggaggagatggtgaagtccctgcagacccgtccagagcccact
gtggccgagtgggacctgatccggctggtgacagaggcccatcggcataccaacgctcag
ggcgcacagtggaaacagaaccgcaaattcctgccagagaagattggccaatctccggtt
gccccgacgtccgacggagacaaggtggacctggaagccttcagcgaattcaccaagatc
atcacccctgccatcaccagagtagtcgactttgccaaaaaactgcccatgttctctgag
ctgccttgtgaagaccaaatcatcttgttgaagggctgctgcatggagatcatgtcgttg
cgtgcagcaatccgttatgaccccgaaagcgagacgctgacgctgagcggggagatagct
gtgaagcgtgagcagctgaagaacggagggctgggtgtggtgtctgacgccatctttgat
ttgggcaaaagcctggcgcagttcaacctggacgacacggaagtggcgcttctgcaggcc
gtgcttctcatgagctcagatcgctcaggcctgacgtctgtggaaaagatagagaagtgc
caggagacgtacctgctggcattcgagcactacatcaattaccgcaagcacaacattccc
cacttctggcccaaactcctgatgaaggtgacggacctgcggatgatcggtgcatgccac
gccagccgtttccttcacatgaaggtggagtgtcccaacgaactgttcccgccgcttttc
ctcgaggtcttcgaggaacaggaagtgtga
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