Xiphophorus hellerii (green swordtail): 116727070
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Entry
116727070 CDS
T07363
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
xhe04514
Cell adhesion molecules
xhe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116727070
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116727070
09142 Cell motility
04810 Regulation of actin cytoskeleton
116727070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116727070
04515 Cell adhesion molecules [BR:
xhe04515
]
116727070
04090 CD molecules [BR:
xhe04090
]
116727070
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116727070
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116727070
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116727070
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin alpha subunits
116727070
CD molecules [BR:
xhe04090
]
Proteins
116727070
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116727070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_2
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
116727070
NCBI-ProteinID:
XP_032430068
LinkDB
All DBs
Position
10:complement(3218611..3235648)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDWKITVALFCLVLKAAVGFNVDSGSWKTLSQSDESFGYQVVQRQSDLLVSAPLLQYEGN
KRGRIYQCNTGGSCSNLVALEQRAAVNMSLGLAMANDPSTRNTMVCGPTIPRDCKTITMY
NGLCYELNPDNTFVKSYPSATEECQIQTDIAFLLDGSGSIAGDDFSRMKEFVKNLIRTFL
GRDTQFAITQFSSYPTTHYYFNTFSTSNWESQIDKIKQLYGGTYTARAIQNVVENVFSQE
RGSRSNVKRILIVITDGASQDRQNLPAATQSADQKNILRFAIGVGNAFTNYYAKQELRAI
ASQPADNFVFQVGSFDALDKIRDNLQAKIFSIEGSQSDGETLKQEMSQEGFRAAYVSGYI
QMTMVGANQWKGGYKKYLLSNVLNNATFEPPSIEPDSYLGYSMAVAKTNNGPLTILGAPR
NQHKGVVMTVFNEKLEDQIRPFQSQTGEYFGAEVCAMDVDNDGVTDLILISSPMYKDVDR
EGRVYVCELSRLSVVCYFDNLSQITTLRGDASVRGRFGSSLAVLPDINADTFNDLAVGAP
LENDGQGSIYIFQGEGGRKINPTYSQKIAASTVQSGLKLFGISISQSSYDQSGDGLPDLA
VGSKGKVVILRSRPVVTVTATVSFNPNLIPTQNPDCSKPLPSNATVCFTMSKLSNVNEAQ
AQVNFTLTLDANRKIPNNRAEISKDVRHKSGSLNLNLNRKECIDMDFFIESCPEDALNPL
SNELRFTFDGLPSGSNPRPSLSPQVKTTTFHYIGFEISCGADEVCEDNLKVDFNFTKSSV
VKVGIDELLNVTVSVKNRGENSYNSRITLTYPVGLSYRKVTPLEGRIECNSVDSEDGVTK
GKTVCSVDKPIFKSNSMAIFIVSYDFNTNRGLSRKIEVTAKATSDNERHSSSSEVDKKQE
IAVKYSVFVTIESSLSYNNFTFGENAAQKPLEQKIKVFNTIRPLNMTVVIKVPVELGDKD
IWMDMSSFQIPDCQRSRDEEPTATDFVDKIKEKKILDCTVAKCRVFRCYQFMERNKDKTY
TISANISSGWIEQIGLSSAKFLLTSTASLEYDENQYIFFSTTSNSDPPVHKIEAEVEVFP
KPDFTKEIIGGSLGGLAFLALLTAGLYKAGFFKSKYNDMINKNAEAEGDAPVEG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggactggaaaattactgtggcacttttctgtttagtgctaaaagctgccgtcggcttt
aatgttgattctgggtcttggaaaaccctgagtcagtctgatgaaagttttggctaccag
gtggtacaaagacaatcagatctccttgtcagcgccccactactacagtacgaagggaat
aaaaggggacggatatatcagtgcaacacaggaggcagttgtagcaatcttgttgctcta
gagcaaagagctgctgtcaacatgtctcttggtttggcgatggcaaatgatccgtcaaca
cgaaacacaatggtctgtggtccaaccattcccagagactgcaaaactatcaccatgtac
aacggtttgtgctatgagctcaatccagataatacgtttgtaaagtcttacccgtctgcc
actgaagagtgtcaaatccaaactgacattgcatttctgctggatggctcaggcagtata
gctggtgatgatttcagcagaatgaaagaatttgtgaaaaatctgatcagaacattcctg
ggaagagatacacagtttgccatcacccagttttcaagttatccaacaacgcattactac
tttaacacgtttagcacttccaactgggaatctcaaattgacaagatcaaacagttatac
ggaggaacatatacagctagagccatccaaaatgttgtggaaaacgtcttctcacaagaa
aggggttccaggtcaaatgtgaaaagaattttaatagtgattacagatggagcatcccaa
gatcgccaaaacttaccagcagcaacacagtcagctgatcaaaaaaacattcttcgattt
gctattggggtggggaacgcattcacaaattactatgcaaaacaagagctcagagcgatt
gcatctcaacctgctgacaattttgtgtttcaagtgggaagctttgatgctcttgacaaa
atacgggacaacttgcaggccaaaattttttccattgaaggatcacaaagtgatggagag
acactgaaacaggaaatgtctcaagaaggcttcagagcagcttatgtgtctgggtatatt
cagatgactatggttggtgctaaccagtggaaaggaggctacaagaaatacttgcttagt
aatgttttaaacaacgccacatttgagccaccatccattgagcctgacagttaccttggt
tattctatggctgttgctaaaaccaacaatggtccactgacaattcttggtgctccaaga
aatcaacacaaaggagttgttatgacagttttcaatgaaaaactggaagatcaaataaga
ccctttcaatcacagactggtgaatattttggggctgaggtttgtgccatggatgtggat
aatgatggtgtgactgatctaatcctcatatcctctccgatgtacaaagacgttgataga
gaaggacgagtttatgtctgtgaattaagtcgtttgagtgtggtttgttattttgataat
ctatcacaaataaccacactaagaggtgatgcgtctgtcagagggaggtttgggtcgtct
cttgctgttctgcctgatataaatgcagacacattcaatgatttggctgttggagctcct
ttggagaatgatggccaaggcagcatctacatattccaaggagaaggaggaagaaaaata
aatcctacttactcacagaaaattgctgcatccacagtccaatcaggcctgaagttattt
ggcatctcaatcagtcagtcttcctacgatcagagtggtgatggacttcctgacttagca
gtgggttcaaagggaaaagttgtcatactcagatccagaccagttgtaacagtgactgcc
actgtgtcgttcaacccaaatctgatcccaactcaaaacccagactgttcaaaaccactg
ccaagcaatgctactgtctgctttactatgagcaaactgtctaatgtgaatgaagctcaa
gcacaggttaatttcactttaacgttggacgcaaatcgtaagataccaaacaaccgagct
gagatcagcaaggatgtgaggcacaagagtggatctcttaatcttaatttaaataggaaa
gaatgcattgatatggacttttttattgagtcttgtccagaagatgctctcaatcctctc
agtaatgagctcagattcacatttgatggtttaccttctggctcaaaccctagaccaagc
ctttctccacaggttaaaaccacaacatttcattatattgggtttgagatcagttgtgga
gctgatgaagtgtgtgaagacaacttgaaggtggattttaacttcaccaaatcctcagtg
gttaaagtcggcatagatgaacttttgaatgtgactgtctctgtgaagaacagaggagaa
aactcgtacaacagtcgcattactctcacatacccagttgggctctcctacaggaaggtt
acacctctggaaggaagaattgaatgcaactctgtggacagtgaggatggtgtaacaaaa
ggaaagacagtctgtagcgtcgacaaaccaatattcaaaagcaactccatggcaatcttc
attgtctcatatgatttcaacaccaacagaggtcttagtagaaagatcgaagtgactgcg
aaggccaccagtgacaatgagcgtcactcctcttctagtgaagtcgacaaaaaacaggag
attgctgtcaagtacagtgtttttgtcacaattgaaagctccctcagctacaacaatttc
acatttggcgaaaatgctgctcaaaaaccacttgagcaaaaaataaaggtttttaacact
atcagaccactaaatatgactgtggtgatcaaagttcctgtagaacttggtgacaaagac
atctggatggacatgagcagttttcagattccagactgtcagagaagtagagatgaagaa
cccactgccactgattttgttgataagataaaagaaaagaaaatattggactgcaccgta
gcgaagtgcagagtgttcaggtgctaccagttcatggaacggaacaaggacaaaacgtac
accatctctgcaaacatcagctcaggatggatagaacagatcggactttcatctgcgaag
ttcctcctgaccagtacagccagtctagagtatgatgagaaccagtatatcttcttctct
acaacctctaacagtgaccctcctgttcacaagattgaagcagaggtagaagtgtttcct
aaaccagatttcactaaagagattataggaggatctctgggagggttggcctttctggct
ttacttactgccggtctgtataaggctggatttttcaagagcaaatataacgatatgatt
aataaaaatgcagaagctgaaggagacgcaccagtggagggatga
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integrated database retrieval system
