Xiphophorus hellerii (green swordtail): 116727090
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Entry
116727090 CDS
T07363
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116727090 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727090 (rab11fip3)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116727090 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
116727090
NCBI-ProteinID:
XP_032430109
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Position
10:1649210..1682267
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AA seq
925 aa
AA seq
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MEPTVVSGPLGHAQWEPEQPFPLGFQPVDPDCGGVLSPSSTGQTGLDFRKGDYDDATPQK
SVEKPVALEDLITVSAFSCGDLQLEGKQASAYLQGLTLTESFEEISDSTLSWLFSPTLTD
VMGKELTLKADSHEESNAVADQGDLISLGSPFNISRRNSGEPFLLVDLSGVTQDSPSELN
AQIAEEQAALPPSQTLSPETGDKGLFPDQVTNLPLTSSSAESCHSPPLLDFDSPASVVPK
NEAQSAVIGHVPSEERSENDEDSVDLMEDRSSFAAKTRSNQEEMALDLYLTAEEVHDDDD
DDGGSEERQHQVASFDLNLPPPPAAVGNARQDDVSSLKAVFDALDQDGDGFVRVEEFLEF
AAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGPEPQLYSYNPGDGAGGCPED
YDEQNEVTDSAYLGSESTYSECETFTDEDTAALVPPEMHEDVETDSGIEATLHDPDDGGS
RFSLNSELHSHSLVTVISGEEEHFEDFGESNTSDLLLESSVDGSMGKGDATPPEQINGSA
VISPSAPACLPDCFQNFLREEALDFFCSQCHRQISRLEDLSTRLNFLEMTSAGKRLSSKK
VARHLLQNSSMTLDTMSDLTRDILELADNDITDKVLLLERRVAELEKESEASGEQHGRLR
QENLQLVHRANALEEQLKEQELQADELLQQENRRHKEALCKLDREKGLELENAQARLQQL
DDENSELRSCVPCLRANIERLEEEKRKLQDEVETQTDRLNEETESRRKMADKLSHERHQN
QKEKESTQELIEDLRKQLEHLQLYKLEAEAKRGRTPGAGLQEYQTRTREAELEQEIKRLK
QDNRTLKEQNDELNGQIINLSIQGAKNLMSASFSDSLAAEISSVSRAELMEAVHKQEEIN
YRLQDYIDKIIVAIMESNPSILEVK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggagcctacagttgtttctggccctttggggcatgctcagtgggagccagagcagcca
tttccgctgggatttcaaccagtggatccagactgtggaggtgttctgagtcccagcagt
actggtcagactggtttggacttcaggaaaggtgactatgacgatgcaacgcctcagaaa
agtgtggaaaagcctgtggccctggaggacctcatcacagtctcggctttttcctgtggg
gatctgcagctggaaggaaaacaagccagcgcttatctgcaagggttgactttaactgaa
agttttgaggaaatcagcgacagcactttgtcgtggctcttctctccaactctgactgat
gtgatggggaaggagttgactttaaaagcagattcccatgaggaatccaacgccgtcgct
gatcagggcgacctaataagcctcggctctccttttaacatctccaggaggaattctgga
gagccgtttctgctggttgacctctctggggtcacccaggactcgcccagcgagttaaac
gctcagattgcagaggagcaggcagcgctccctccctctcagactttgtcacctgaaacc
ggagacaaaggtttattccctgatcaagtgactaatctgcctttaaccagcagctctgct
gagagctgccattcgccacctttgttggattttgacagtcctgcttctgttgtaccaaaa
aatgaggctcagtctgctgtaatcggccatgttccttcagaggaaaggagtgaaaacgat
gaagactctgtggatttgatggaagaccgaagtagtttcgctgctaaaacgcgatcaaac
caggaggaaatggctctggatctgtatttgactgctgaggaggttcatgatgatgatgat
gatgatggtggttcagaggagaggcagcatcaggtggcgtcttttgatttaaaccttcct
cctcctccggcggcagtgggaaacgccagacaagacgacgtgtcttctctgaaagcggtg
ttcgacgccttggaccaagacggagatgggttcgtccgcgtcgaggagtttttggagttt
gcggcggcctatggggcagatcaggtgaaggacctgaccaagtttttggaccccagcggt
ctcggcgtcatcagttttgaagatttccacagaggaatctctgcgatcagtaatggaggt
ccagaaccgcagctctacagctacaacccaggggacggcgccggcggctgcccagaggat
tacgacgagcagaatgaggtgacggacagcgcgtacctgggctcagagagcacctacagc
gagtgtgagacgttcaccgatgaggacacggcggcgctggttcccccagagatgcacgag
gacgtggagacggacagcggcatcgaagccacgctgcacgacccggacgatgggggaagc
aggttctccctgaactcggagctccacagccactccctggtgacggtcatcagcggagag
gaggagcacttcgaggactttggggagagcaacacgtcggacctgctgctggagagcagc
gtggacggctccatggggaagggcgacgccacgccgcccgagcagatcaacggctccgcc
gtcatttcccccagcgcccccgcctgcctccctgactgcttccagaacttcctcagggag
gaggcgctggactttttctgtagccagtgtcacaggcagatcagtcgcctggaggatctg
tccacacgcctcaatttcctagagatgactagcgccgggaagcggctttccagcaagaag
gtggcgaggcatctgctgcagaacagctccatgactctggacaccatgagcgacctgacg
cgggacatcctggagctcgccgacaacgacatcacagacaaggtgctgctcctggagcgg
cgcgtggcggagctggagaaggagtcggaggcgtcgggcgagcagcacggccggctgcgg
caggagaacctgcagctggtgcaccgggccaatgcgctggaggagcagctgaaggagcag
gagctgcaggccgacgagctgctgcagcaggagaaccgccgccacaaggaggcgctgtgc
aagctggacagggagaaggggctggagctggagaacgcccaggcccggctgcagcagctg
gacgatgagaacagcgagctgcggtcctgcgttccctgtctcagagcgaacatcgagcga
ctagaggaggagaagcggaagctccaagacgaagtggaaactcagaccgacaggctgaac
gaggagacggagtcccgcaggaagatggccgacaagctgagtcacgagcgccatcagaac
cagaaggagaaggagagcacccaggagctgatcgaagacctgcggaagcagctggaacat
cttcagctctacaagctggaggctgaggccaagcgaggccgaacccccggcgccgggctg
caggagtaccagacccggacccgggaggccgagctggagcaggagatcaaacgactcaaa
caggacaaccgaactctgaaagagcagaacgacgagttgaacggacagatcatcaacctg
agcatccagggagccaagaacctgatgtcggcctccttctccgactccctggcagccgag
atcagctccgtgtctcgggctgaactaatggaggccgttcacaaacaggaggagatcaac
taccgactccaggattacatcgataagatcatcgtggccatcatggagtccaacccctcc
atcctggaggtcaaatag
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