KEGG   Xiphophorus hellerii (green swordtail): 116727169
Entry
116727169         CDS       T07363                                 
Name
(RefSeq) protein Tob1-like
  KO
K14443  protein Tob/BTG
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116727169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116727169
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116727169
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     116727169
SSDB
Motif
Pfam: BTG PAM2 T2SSM
Other DBs
NCBI-GeneID: 116727169
NCBI-ProteinID: XP_032430297
LinkDB
Position
10:complement(19638913..19643155)
AA seq 337 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEEAAKESGLDIADVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GSELDREIKNSFNPEAQVFMPISDPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSSGRGGNNNSSTAAGGGSGGSTKAARTSPTNNLGLNVNTLLKQKA
MSTSMHSLYGLGQQQKASALSPNAKEFVFPSLQGQSSPGAAFPADGPLGLGPLQYNNAFD
VFTAYGSLNDKSLMDGLSFSLSNMQYSNQQFQPVMAN
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgcagcttgaaattcaagtagcactcaacttcatcatttcctacctgtacaacaaactc
ccaaggcggcgtgtgaatattttcggcgaagagcttgagaggcagctgaagaagaagtat
gaaggccactggtacccggacaagccgtacaaaggctcggggttccggtgcatccatgta
ggcgagaaggtggaccccgtggtggaggaggcggccaaagagagcgggctggatatcgcg
gacgtccggaacaacttgccccaggacctgagcgtctggatcgaccccttcgaggtctcc
taccagatcggggagaagggccccgtcaaggtgctgtacgtggacgacaacaacgagaac
ggctctgagctggaccgggagatcaagaacagctttaaccccgaggcgcaggtgttcatg
cccatcagcgaccctgtcggggcatcctcagagtccagctcaccatctcctccctttggc
cagtcggccgccgtcagcccatcgttcatgccgcgctccacccagcccttaaccttcacc
accgccaccttcgccgccaccaagttcggctccaccaagatgaagagcagcggccgcggc
ggcaacaacaacagtagcaccgccgctggcggaggcagcggcggcagcaccaaggcggcc
cgcacctcccccaccaacaacctgggtctgaatgtcaacactctactgaagcagaaagcc
atgtccacctccatgcactcgctgtacgggctgggccagcagcagaaggcctccgccctg
tcacccaatgccaaggagtttgtgttccccagcctgcagggccagtccagtcccggggcc
gcattccccgccgacggtcccctggggctcggccccctgcagtacaacaatgccttcgac
gtgttcacggcctacggaagcctgaacgacaagtcgctcatggacgggctcagcttcagc
ctgagcaacatgcagtattctaaccagcaattccagccggtcatggctaactaa

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