Xiphophorus hellerii (green swordtail): 116727169
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Entry
116727169 CDS
T07363
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116727169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116727169
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116727169
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116727169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
T2SSM
Motif
Other DBs
NCBI-GeneID:
116727169
NCBI-ProteinID:
XP_032430297
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Position
10:complement(19638913..19643155)
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AA seq
337 aa
AA seq
DB search
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEEAAKESGLDIADVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GSELDREIKNSFNPEAQVFMPISDPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSSGRGGNNNSSTAAGGGSGGSTKAARTSPTNNLGLNVNTLLKQKA
MSTSMHSLYGLGQQQKASALSPNAKEFVFPSLQGQSSPGAAFPADGPLGLGPLQYNNAFD
VFTAYGSLNDKSLMDGLSFSLSNMQYSNQQFQPVMAN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaattcaagtagcactcaacttcatcatttcctacctgtacaacaaactc
ccaaggcggcgtgtgaatattttcggcgaagagcttgagaggcagctgaagaagaagtat
gaaggccactggtacccggacaagccgtacaaaggctcggggttccggtgcatccatgta
ggcgagaaggtggaccccgtggtggaggaggcggccaaagagagcgggctggatatcgcg
gacgtccggaacaacttgccccaggacctgagcgtctggatcgaccccttcgaggtctcc
taccagatcggggagaagggccccgtcaaggtgctgtacgtggacgacaacaacgagaac
ggctctgagctggaccgggagatcaagaacagctttaaccccgaggcgcaggtgttcatg
cccatcagcgaccctgtcggggcatcctcagagtccagctcaccatctcctccctttggc
cagtcggccgccgtcagcccatcgttcatgccgcgctccacccagcccttaaccttcacc
accgccaccttcgccgccaccaagttcggctccaccaagatgaagagcagcggccgcggc
ggcaacaacaacagtagcaccgccgctggcggaggcagcggcggcagcaccaaggcggcc
cgcacctcccccaccaacaacctgggtctgaatgtcaacactctactgaagcagaaagcc
atgtccacctccatgcactcgctgtacgggctgggccagcagcagaaggcctccgccctg
tcacccaatgccaaggagtttgtgttccccagcctgcagggccagtccagtcccggggcc
gcattccccgccgacggtcccctggggctcggccccctgcagtacaacaatgccttcgac
gtgttcacggcctacggaagcctgaacgacaagtcgctcatggacgggctcagcttcagc
ctgagcaacatgcagtattctaaccagcaattccagccggtcatggctaactaa
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integrated database retrieval system