Xiphophorus hellerii (green swordtail): 116727171
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Entry
116727171 CDS
T07363
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04520
Adherens junction
xhe04810
Regulation of actin cytoskeleton
xhe04820
Cytoskeleton in muscle cells
xhe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116727171
04520 Adherens junction
116727171
09142 Cell motility
04820 Cytoskeleton in muscle cells
116727171
04810 Regulation of actin cytoskeleton
116727171
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116727171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116727171
04147 Exosome [BR:
xhe04147
]
116727171
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116727171
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116727171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
116727171
NCBI-ProteinID:
XP_032430298
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All DBs
Position
10:complement(8902549..8932570)
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLSVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTYEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKSWLRDPNAPPGDAGEQAVR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGASPAAMQKAQQVSQGL
DVLAGKAGNAARKLEAMTNSKQAIAKRIDAAQSWLADPHGSPEGEENIKALLNEARKIAD
MCEDPKEREEILRSAGELAAMTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKTEQAQRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALQGPYRQE
LMGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDAPNRDEVFEDRASNFENHANRLGATAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTVLVDEAIDTK
SLLDASEEAIKKDLDKCRVAMNNHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EIVKAASDELSRTISPMVMNAKAVAGNIQDPNLQKGFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPELDQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEHKAGEKVNEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttccacacgaagacgatagaaagtatcctggagccggtggctcagcagata
tcccatctggtgataatgcacgaggaaggtgaagttgacgggaaggctatcccagatctg
tccgcgccggtggccgccgtgcaggcggccgttagcaacctggttcgggttggaaaggat
accgtgcaaacaacagaggaccagatcatgaaaagggatatgccaccagcctttatcaaa
gtggagaatgcctgcacaaagctggttcaagctgcctccatgctgaaagccgacccgtac
tctgttcctgctcgggattacctcatcgatggatctcgaggcattctgtctggcacatct
gacctgctcctcacttttgatgaggcagaggtccgtaaaataatccgtgtgtgcaaaggc
atcttggaatatctgagcgtggccgaggtggtggagtcaatggaggacttgatcacatac
acaaagaatctggggccaggtatgacaaagatggcaaaaatgatcgatgagcgccagcag
gagctcacacatcaggagcatcgtgtgatgctggtcaattccatgaatacagtcaaagag
ctgctacccatcctcatctcaggtataaaaatctttgtgacgaccaagacatctgggagc
cagggtgtggaggaagccctgaagaaccgaaacttcacttatgagaagatgagcgctgag
ataaatgagatcatcagagtgctgcagctcacatcctgggatgaagacgcctgggccaat
aaggacactgaggccatgaagagggctctgggactgattgattcaaagatggctcaggct
aaaagctggctgagggatccaaacgctccaccaggggacgccggcgagcaggccgtccgt
cagatcctggatgaagccgggaaagtcggtgagctctgtgctgggaaggagcgccgggac
atcctgggaacggccaagactctgggtcagatgactgaccaggtgtctgagatgagggca
agaggtcaaggagcatccccggctgccatgcagaaggcacagcaggtttcccaggggctc
gacgttctggccggcaaggctggcaatgctgctcgcaaactcgaggccatgaccaactcc
aagcaggccatcgccaaaaggatcgacgctgcacaaagctggcttgcagaccctcatggc
agcccagagggagaggagaatatcaaggccctcctcaatgaggccagaaagattgcagac
atgtgtgaggatcccaaagaaagagaagagattttgcgctctgctggagagctggccgcc
atgactgccaagctgtctgaactcagaagacagggtaaaggtgacactcctgaggcccga
gctttggccaagcagatagcaacagccctgcagaacctgcagtcaaagaccaacaaggct
gtggccaacagccggcctgcgaaggccgccgtccacctggaggggaagacagagcaggcg
cagcgctggattgacaaccccaccgtggacgacagcggtgtgggccaggcagccatccgt
gggctggtggccgagggccgccggctggccaacgctctgcagggcccgtacaggcaggag
ctgatggggaagtgcgagcaggtggagcagctcatggcgcagctggctgacttggccgcc
cgtggcgaaggggactccccgcaggcacgcgctgtggctcagcagctccaggaagccttg
aaagacctgaaaggaaagatgcaggaggcaatgactcaggaagtgtctgacatcttcagt
gacaccaccacccccatcaagttgctggcagtggctgctacagcgcccctcgacgctccc
aacagagatgaggtctttgaggacagagcctccaactttgagaaccacgccaataggctc
ggcgccacggccgagaaggcggccgcagtcggcactgcgaacaagagtacagtggaggga
atccaggctgccgtcaagtcaaccagagatctaacaccacaagtggtgtctgctgctcgc
attctgctgagaaaccctggcaaccaagcagcatatgaacattttgagaccatgaagaat
cagtggattgacaatgtggaaaagatgactgttttggtcgatgaggccattgataccaaa
tctctgctggacgcctctgaggaggccataaagaaggacttggataaatgccgcgttgcc
atgaacaatcaccagcctcagatgctggtggctggtgccaccagcattgcccgaagagcc
aaccgcatccttctggtggcaaaacgagaggtggagaactccgaagatccaaaattcaga
gaaatagtgaaagctgcatcagatgaactgagccggacgatttctcccatggtgatgaat
gcaaaggctgtggctggaaatatccaggatccaaatcttcagaagggatttttggattcg
ggttataagattcttggagctgtagcaaaggttagggaggccttccagcctcaagagcca
gacttcccaccaccacctccggagctggatcagctcagcctcaatgatgaagcagcacct
cccaagcctcctcttccagagggagaagttcctccacccagacctcctcctcctgaggag
aaagacgaggagttcccagagcacaaagctggagagaaagtcaatgagcccatgatggtg
gctgctaggcagcttcacgacgaagctcgcaaatggtccagcaaaggaaacgacatcatc
ggcgctgccaagcgaatggccctgctcatggcagagatgtcccgtttggtgcgtggaggc
agcggaaacaaacgcgccctgatccagtgcgccaaggacatcgccaaagcctctgacgaa
gtcacacggctggcgaaggaagtggccaagcagtgtacagacaaacgaatcaggaccaac
cttctccaggtgtgtgagcgcattcccaccatcagcactcagctcaaaatcctgtccact
gtcaaggccaccatgttgggccgtaccaacatcagtgaagaggagtctgagcaggcgact
gaaatgttggtccacaacgcccagaacctgatgcagtctgtgaaggagactgtcagagag
gcggaggcggcctccattaagatccggacagatgcaggtttcaccctccactgggtcaga
aagaccccctggtatcagtaa
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