Xiphophorus hellerii (green swordtail): 116727175
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Entry
116727175 CDS
T07363
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116727175 (wdr24)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727175 (wdr24)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
116727175 (wdr24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
zf-RING_16
eIF2A
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
116727175
NCBI-ProteinID:
XP_032430305
LinkDB
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Position
10:complement(1413859..1421421)
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AA seq
783 aa
AA seq
DB search
MEKMSRVTTALGSSSITGRTMFCHLDAPANAISVCRDAAQVVVAGRNIFKIYALEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEAYMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPEKKFHLATCSMMVDHNIYVWDIRRPFIPFATFEEHKDVT
TGIVWRHQHDPHYLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLMGDLAFAVNESLV
SSDGGRKPYPGGDRRYPFFSFKKPNPMEQFAHVSSALSVFETDLDSSRMDWFVKTAQLYL
LSGKPFTELCDHNATVARELKRPQVSTTWTMLRIMFSDPAPGPNHSLSKLGGLPLMNSFS
MKEMGPESRLERCKGESRQDNIHLELGNSHISNNNEENEETEGSDGPTEYMFGDAELDDD
DLYPLEHDNQTVAEEPVYTLPPEAFQLRHEIIDNPSVPEHLQQDKADSPHVSGNEAEVAC
LTPIESFSLISISQPLYSPHLHASFFCPIVREMLSHYAERGDVQMAVSVLIVLGEKIRKE
IDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHINCSNCKRPMS
NKGWICDRCRQCASACAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKNNSHCPAGCGHLC
EYT
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgtctcgggtcacgacggccctcggcagcagcagcatcaccggccgaacc
atgttctgccacctggacgctccggccaacgccatcagcgtgtgccgggacgccgcccag
gtggtcgtcgccggacgcaacatcttcaagatctacgccctggaggaggagcagtttgtg
gagaagctgaacctgcgcgtcggccgcaaaccgtcgctgaacttcagctgcgccgacgtc
atgtggcaccagatggaggagaacctgctagccacggccgccaccaacggcgccgtggtc
acctggaacctgggcaagccgtcacgcaacaagcaggaccagctgttcacggagcacaaa
cgcaccgtcaacaaggtgtgcttccacccgacggaggcctacatgctgctgagcggctcg
caggacggcttcatgaaatgcttcgatctgcgcaagaaggagtcagtcagcaccttctca
ggtcagtcggagagcgtgagggacgtccagttcagcatgaaggactatttcaccttcgct
gcttcctttgaaaacgggaacgtccagctgtgggacatcaggcggccggatcgctacgag
cggatgttcacggctcacaccggccccgtgttctgctgcgactggcatcccgatgacagg
ggttggctggccaccggcggcagagacaagatggtgaaggtttgggacatgaccaccaac
cgcgccaaggagatctactgcgtccagaccatcgcgtcggtggctcgcgtcaaatggcgc
ccggaaaagaagttccacctggccacctgctccatgatggtggaccacaacatctacgtg
tgggacatccgcagacctttcatccccttcgccaccttcgaggagcataaagacgtgacc
actgggatcgtgtggcgccaccagcacgacccccactacctgctgtccggctccaaggac
agcacgctctaccagcacatgttcaaggacgccacgcggcccgtggacaaggccaacccc
gagggcctgtgcttcggcctcatgggcgacctggccttcgccgtcaacgagagtctggtc
agcagcgacggcggcaggaagccttaccctggaggcgaccgccgctacccgttcttttcc
ttcaagaagcccaacccgatggaacagttcgcccacgtgtccagcgctctgagcgtcttt
gagacggacttggacagcagccgcatggactggttcgtaaagacggcacaactttacctc
ctcagtgggaagccgtttacggagctgtgtgaccataacgctacggtggcccgggagctc
aaacgaccgcaggtttcaacaacatggacgatgctgagaatcatgttttctgacccggca
cccggtccaaaccacagcctcagtaaactgggcggtttaccactaatgaacagtttcagc
atgaaagaaatgggtccggagagcagactggagcgctgcaaaggcgaaagccggcaggat
aacatccacctggagctgggcaactcgcacatcagcaacaacaacgaagagaacgaggag
acggagggcagcgacggccccacagagtacatgtttggagacgcagagctggatgacgac
gacctttaccccctggagcacgacaaccaaacggtggcggaggagccggtgtacacgctg
cctccagaggccttccagctgcgccacgagatcatcgacaacccgtcggtgccggagcac
ctgcagcaggacaaggccgactcgccgcacgtcagcggcaacgaggcggaagtcgcctgc
ctgacgcccatcgagtcgttctcgctcatctccatttcccagccgctgtacagcccgcac
ttacacgccagcttcttctgccccatcgtgcgcgagatgctgagccactacgccgagcgc
ggcgacgtgcagatggccgtgtccgtgctcatcgtcttgggggagaagattcgcaaggag
atcgacgacctcactcaggagcactggtacatgtcctacatagacctgctgcagcggttc
gaactgtggaacgtttccaacgaggtcatcaagctgagtacctgcagcgccatcacctgc
ctcaaccagacctccaccactctgcacatcaactgcagcaactgcaagcggccaatgagc
aacaagggatggatctgtgacaggtgtcgccagtgtgccagtgcgtgcgcggtgtgccac
catgtggtgaagggactgttcgtctggtgccagggctgcagccacggcggacacctggag
cacatcatgaactggctgaagaacaactctcactgccctgcaggatgcggccacctgtgt
gaatacacctga
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