Xiphophorus hellerii (green swordtail): 116727232
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Entry
116727232 CDS
T07363
Symbol
pdzd7
Name
(RefSeq) PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116727232 (pdzd7)
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116727232 (pdzd7)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116727232 (pdzd7)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
116727232 (pdzd7)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116727232
NCBI-ProteinID:
XP_032430432
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Position
10:complement(13999105..14014182)
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AA seq
883 aa
AA seq
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MASSSDPSRREKGPATQGSHTATRDLLRKKEQRRRGIRASSPMGRVILINSPVDGGDDSE
DLHTVTVDKSVDGKLGFSVRGGSEHGLSIFVSKVEDDSTAQEAGLQVGDKLVEVNGVSLE
SITMSSAVKVLTGNNRLRMVVRRVGKVPGIRYSKEKTTWVDLVHRRMVVEESGRTPSEAS
SDSALQRIVHLYTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQNGIKIGDQILAAN
GVSFQDISHSSAVEVLKSHTHIMLTMKEAGRYPAYKEMVAEYRWLNKLANGTQPSSSQAS
DSNSSTSSLSSGTPVSSLSGLSQVMFPHSLPFGSDMVDVCISTEDLRSESELTDSAIQTD
FSAQRMETDTTRSLGPTTLLKDTAIRGEESRRWKESPKTAVLLALSRPSRPISRSQSQVT
VAEINQKKDKKKQKEKQAEEKSTLQRSKTFVNLLFKGGRKRDASGGRSKSPFRESEEGRN
VSVMPNSEMLGVVEDMARRLLTEEEVSAVMTACRMYTTERSVENLIRHLLVVLDRPEKLL
LLREVRLVLSPSDLSVFNNMVTAVEAEAYDLLKYRSVRTPPLRSPISGRAPKRRLITPIP
DYRGGFELHSAEEVEKESHLLEELEKLSLTGSQGSRGRTKTCSSFSALLDIPVDGYKPES
RNTRSRSAGPLLPNWLLAHSSDSPPPLRTDIGTTRSVHFDEASLRSSSDKVETNSERGRT
FFRNSHSQGRRERSADRSKNGAFTVQSANRRSRPLLSQVFGTSQERQMNGHRTSSENRLN
GTEPEQEHRLKTVSISKTKQSLGISISGGIESKVQPTVKIEKIFPGGAASMCEVLKAGME
LVSVDGVSLQGVTHQHAVDIIRKAFSNKAKDPMVFVVKVPKNF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcatcagatccgtcccgcagggaaaagggtccagccacacaaggttcgcac
acggcaacacgcgacctcttacggaagaaggaacagcgtcgccgtggaatccgagcctcc
tcgcctatgggtcgggtcatcctcatcaactctcctgtagatggtggagatgatagtgaa
gacctccacacagtcacagtggataagagtgtggacgggaagctcggcttcagtgtgcgt
ggcggctcggagcacggcctcagtattttcgtcagtaaggtggaggacgacagcacggcg
caggaggcgggcttacaggtcggagataagctggtggaggtgaatggtgtcagcctggag
agcattaccatgagcagtgccgtgaaagtgctgacgggcaacaacaggttaaggatggtg
gtgaggcgagtggggaaagttcccggcatccgctattctaaggagaagacaacctgggtg
gacctggtccataggcggatggtggtggaggagagcgggcggacaccttcagaagccagt
tctgacagcgctctgcagaggatcgtccacctttataccacctctgacgactactgtctc
ggctttaacatacgagggggaaaggagtttggtctcggcatctacgtctccaaactggat
ccaggcggtttggccgagcagaatgggattaagattggagaccagattctggctgccaat
ggcgtgagctttcaggacatcagccacagcagtgctgtggaggtgctgaagagccacaca
cacatcatgctcactatgaaggaagccgggaggtaccctgcttataaagaaatggtggca
gaatacaggtggttgaataaattggccaatggtactcagccatcttcctcccaggcttca
gactccaactcttcaacctcctctctgtcatctgggaccccggtcagctccctgagcggc
ctgtctcaagtcatgtttccgcacagcctgccgttcggttcagacatggtggacgtttgc
atctctacagaggacttgaggtctgagtctgaactaacagattccgccatccagacagat
ttttctgctcagagaatggaaacggacaccacccgtagcctgggaccaaccacactgctc
aaagacacagcgatccgtggagaggagagcaggaggtggaaggagtctcccaaaacagct
gtgctgctggcgctcagcagaccaagccgaccaatcagcaggtcgcagagccaagtcact
gtagcagagatcaatcagaagaaagacaagaagaagcagaaagagaagcaagcagaggag
aaaagcactctgcagcgctcaaagacctttgttaacctgctgttcaaaggagggcgcaag
agagacgcctcaggtgggcgctccaaatcaccattcagagaaagcgaagagggacgaaat
gtcagtgtgatgccaaactcagagatgcttggcgtggtggaggacatggcgcgaaggctg
ctgacggaggaggaggtgtctgctgtgatgacggcatgccgaatgtatacaacagagagg
tcagtggagaacttgatacgccacctgctggttgtgctggaccgacctgaaaagctgctg
cttctgagggaagtcagacttgtgctttcgccatctgatctgagtgttttcaacaacatg
gtgaccgctgttgaagctgaagcctacgatctcctcaaatatcggtcagtccgaactcct
cctcttcgctcccccatttctggtcgagcccccaaacggcgcctcatcacacccatccca
gattataggggtggctttgagctccacagtgctgaggaggtggaaaaagagagccacctg
ctggaggagctggagaagctcagcctgactggctctcagggatccagggggagaacaaag
acctgtagctctttctcagctcttctggacatacctgtggacggatataagccagagtcc
agaaacaccaggtcccgctctgctggtcccttgcttcccaattggctgctggcccacagc
agtgactccccacctcctctccgtacagacattggcaccactcgctccgtccactttgat
gaggcttctctgcgctcatcttcagataaggtggagacaaactctgagaggggaaggact
ttcttcaggaacagccactctcaaggcaggagggagagaagtgcagataggagtaagaac
ggtgcgttcaccgtgcaaagtgcgaaccgtaggagccgacccttgctgtcgcaggtgttt
ggtacgagtcaggagcgacagatgaacggtcatcggacttcctcagagaacaggctcaac
ggtactgagcctgaacaggagcatcgactgaagacagtcagcatctccaagaccaaacag
tctctgggcatcagcatttctggtgggatcgagtcaaaggtacagccaaccgtgaagatc
gagaagatctttcctggaggagccgcctccatgtgcgaggtgcttaaggctggaatggag
ttggtgtctgtggatggagtttccctccaaggagtgacccaccagcatgccgttgacatc
atccgcaaagccttcagcaacaaggccaaagaccccatggtgtttgtggtcaaagttccc
aaaaacttctaa
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