Xiphophorus hellerii (green swordtail): 116727258
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Entry
116727258 CDS
T07363
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 2 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116727258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727258
03036 Chromosome and associated proteins [BR:
xhe03036
]
116727258
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
116727258
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116727258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
THAP
zf-FCS_1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
116727258
NCBI-ProteinID:
XP_032430473
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Position
10:22755984..22768133
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AA seq
829 aa
AA seq
DB search
MPYHCVAYGCGKTVEDGVTLFRFPKDPDEFRKWEKQVQRTRVKWVATSFSHLCSEHFGKE
YFEDKMPSGTLKLRPGAAPTVFVRPHCSSCGGVGCKQCLPSIQRRASAAETAERKNNGEH
KGKEDDDKNIRKEECVPKVRVIRREKARSDGPLICEMCGTTGTFSTFFSKSKRFCSLSCS
RSYSSNSKRSSILARLQGRPPSKKATVLNRMNKTSATAGVEAHSVFDWGSYLTTEAALAA
PVSGFAHAPLSSDWDDVVVGMKVEVLNTNAVLSNKVYWIATVLQVAGYKALLRYEGYEHD
SSHDFWCSIVSGELNPIGWCSMTSKLLVPPQDAKNISDWKLYLMKKLVGSTTLPVDFYVK
LAESMKPSFRVGTRVEVVDPKHVSRTRLAVVDAVVGGRLRLVYADQSDVPDNVVFDFWCH
MWSPLVHPLGWSKTVGHTIKAYGSNMEASSNPKGNSENVFQGLFKKPRIVYMGEGFFEEG
MKLEAIDPLNLGNICVATVHKVLLDGYLMVGIDGTELNNGADWFCYHASSHAILPINFCK
RNDITLTGPRGSDPQTFTWDKYLQETKATAAPARLFNTDNPGHGFSPNMKLEAVDLMEPR
LVCVATVKRCVGRLLLIHFDGWEDEFDQWVDHQSPDIYPVGWCELVGYQLQPPPGLGENI
SHLTENHSAQYKKPKPIVHGRKRRKYGRKRMIQEQASDASNELPESSQSSQPEIPAIKTE
AEEQEIAPVQVKVEEMETPIENPHKTRQASLRPVKQEKTEQQAESMQSGREEVGSPKENL
RETTVQSENKNTDQEGLKAGSRENDSSQNEMWESNTEQDRAGETEDIDV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgccctaccactgcgtggcctacggatgtggcaaaactgtcgaagatggggtgactttg
tttaggttcccaaaggatccagatgagttccgcaaatgggagaagcaggttcagaggacc
cgcgtgaagtgggtggccacaagcttctctcacctctgcagcgagcactttggcaaagag
tactttgaggacaagatgccttcagggacactgaagctgaggccgggagcagctcccaca
gtgttcgtccgaccgcactgctcctcctgcggaggagtgggctgcaaacagtgcctgcct
tccatccagcgccgcgcctcggcagcagaaacagcagagcgcaagaataatggagaacac
aaaggaaaggaggatgacgataagaacattcgcaaagaagaatgtgtgccaaaagtacgg
gtgatcaggagggaaaaagcaagaagtgatggaccattgatttgtgagatgtgtggaaca
accggcactttcagcaccttcttttcaaaatcaaagcgtttttgcagcttatcctgttca
cgctcttattcatccaactccaagaggtcgtccatactggcacgtctgcaggggcgtcca
ccctcaaagaaagctacagttctgaacagaatgaacaaaacctccgctactgcaggagta
gaagcacattcagtgtttgactggggctcctacctgacgactgaagcagcgctggctgct
cccgtctccggcttcgcgcacgctccactcagctctgactgggatgatgtggtcgtcggg
atgaaggtggaggtcctcaacaccaacgctgtcctgtccaataaagtctactggattgct
actgttcttcaggtcgcaggctacaaagctctgcttcgatacgaaggctacgaacacgac
agcagccatgacttctggtgcagcatagtgtcgggggagctgaacccgattgggtggtgc
tccatgaccagcaagctgctggtgccgccgcaagatgcgaagaatatctccgactggaaa
ttgtatctgatgaagaagctggtgggctccaccactctgcccgtcgacttctacgtgaag
ctggcggagagcatgaagccctctttcagggtcggcacacgcgtggaggtggtggacccc
aaacacgtgagccgcacccgcctggccgtcgtcgacgccgtcgtcggcggccgtctccgg
ctggtgtacgccgaccagagcgacgtccccgacaacgtggtcttcgacttctggtgccac
atgtggagtcctcttgtccacccgctgggctggtccaagaccgtgggtcacaccattaaa
gcatatggaagcaacatggaagcttcaagcaacccaaagggaaacagtgaaaatgtgttc
cagggcctctttaaaaagcccaggatcgtctacatgggggagggattctttgaggaggga
atgaagctggaagccattgatcctctaaatctgggaaacatctgtgtcgccactgttcac
aaggtgctgctggacggttacctcatggtgggcatcgacgggacggagctgaacaacggc
gccgactggttctgctaccacgcctcctcccacgccatactgcccatcaacttctgtaaa
aggaacgacatcaccctcaccgggccccgaggttctgatcctcagactttcacctgggac
aaatatctgcaggagacaaaagcaacggctgcaccagcacgactgtttaacactgacaac
ccaggccacggtttctcccccaacatgaagctggaggccgtggacctgatggagccgcgg
ctggtgtgcgtcgccacggtgaagcgctgcgtgggccgcctcctgctgatccacttcgac
ggctgggaggacgagtttgaccagtgggtagaccaccagtctccagacatctaccccgtc
ggatggtgcgagctggtgggctaccagctgcagccgcctccaggactcggtgaaaacatc
tcacatttgactgaaaaccactcggcgcagtacaagaagcccaaacccatcgtgcacggc
agaaagagaagaaagtacggtaggaagcggatgatccaggaacaagcgagcgacgcctct
aacgagctgccagaaagttctcagagtagtcagccggagatcccagccatcaaaactgaa
gcggaggaacaagagatcgccccggtccaggtgaaagtggaggagatggagactcctatc
gagaatcctcacaagactcggcaagcctcactgagacctgtaaagcaggagaagacggag
cagcaggcggagtcgatgcagtccggccgagaggaggttggatctccgaaggaaaactta
agagaaactaccgttcagagtgaaaacaaaaacacagatcaagaaggcttgaaggccggg
agtcgagaaaacgacagcagccagaatgagatgtgggagagcaacactgagcaggaccgg
gccggagaaactgaggacatagacgtatga
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