Xiphophorus hellerii (green swordtail): 116727278
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Entry
116727278 CDS
T07363
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116727278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116727278
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Serotonin (5-HT3)
116727278
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MamF_MmsF
Motif
Other DBs
NCBI-GeneID:
116727278
NCBI-ProteinID:
XP_032430510
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Position
10:complement(9062887..9077428)
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AA seq
490 aa
AA seq
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MGKANTLPVGKCLDFIEMLLRDFILHFLLIVVEVASSGKVCSYQEVLDYLNLSRGNELFS
LTRPVKDFRKATKVHLEVLLYAILDVREIDQTFVPYVWIIMHWQNDFISWDSSQFCNITK
VTIPTDILWKPDLTIEEMTERDKAPPSPYLTITSSGTVLVQNDQVLVSTCMMQVYKFPFD
VQSCTLSIKSVVHSVEEINLLHTLNSSVTTNWSRELMSTQYEWLFVNITVTTKTVKPFGS
QQDTIIYTIYMKRRSILYIVNFLLPVLFFLCLDLSSFLISDRGGEKISFKVTVLLAVTVM
QLILNDILPSSSDKIPLIAVYCIGIFTLMFLSLLETILMMYLMDIESESQENEMNKRHSL
EDGCGDSQDRDANYQSCEKGRSSSLWALGFYGLLSNYNFFLESQFLTRSSSFQGCGSRLT
EQLQEFQNFSDGLKEITRMLSLLVNNAKEERKPGFWTRKIKIINRAYFILYVTASSLFLG
LMFSIWTADE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagccaacaccttgcccgtcgggaagtgcctggacttcatagaaatgctgctg
agagacttcattcttcacttcctcctcatagttgtagaagtggcttcctctggaaaagtg
tgtagttatcaggaggtcttagactacctgaacctgagcagaggcaatgagctgttttcc
ttgacccgacctgtgaaagatttcagaaaagccacaaaggtgcatctggaagtattgctg
tacgctatcctggatgtgagagagattgaccagacatttgtaccatatgtttggataatt
atgcactggcagaatgacttcatttcctgggattccagtcaattctgtaacatcacaaag
gttactattcccacagatattctgtggaagccagatctcaccattgaagaaatgacagaa
agggataaagcccctccaagtccttacctcaccatcaccagcagtggtacagtcttggtc
cagaatgatcaggtgctggtcagcacatgcatgatgcaggtttacaaattcccatttgat
gttcagagctgcactctctcaattaaatcagttgttcactccgttgaggaaattaacctg
ttgcataccttgaactcctcagtgactactaattggtcacgtgagttgatgagcacgcag
tatgagtggctgtttgttaacataacagttaccaccaaaacggttaaaccattcggatcc
cagcaagacaccattatttacactatctatatgaaaaggagatctatactctacatcgtc
aacttcctgctgcctgtcctcttcttcttgtgcctggatttgtcctccttcctgatctca
gatagaggtggtgagaagatcagcttcaaggtcacggtgctgctggctgtcaccgtgatg
cagctcattcttaatgacattctgccgtcatcgtcagacaagatcccactgattgcggtc
tactgcattgggatttttacgctgatgttcctcagcctcctggagacaatcttgatgatg
tatctgatggacatcgagtctgaatcccaggaaaatgagatgaacaaacgacacagtttg
gaagacggttgtggagacagtcaagatagagacgccaactaccaaagctgtgagaaaggt
aggagtagcagcttgtgggctctgggcttttatggcctgctgtctaattataattttttt
ttagaatctcagtttttaaccaggtcatcatctttccagggctgcggcagccgactgacg
gagcagctgcaggagtttcaaaacttctcagatggactgaaggagataacaaggatgctg
tctctgcttgtgaacaacgccaaggaagaaaggaagcctggcttttggaccagaaagatt
aaaatcatcaaccgagcttactttatactctatgtaacagcttccagcttgttcttgggc
ctcatgttttccatctggactgctgatgaataa
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