Xiphophorus hellerii (green swordtail): 116727282
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Entry
116727282 CDS
T07363
Symbol
pde6c
Name
(RefSeq) cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'
KO
K13757
cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' [EC:
3.1.4.35
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00230
Purine metabolism
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
116727282 (pde6c)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
116727282 (pde6c)
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GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
GAF_3
HD-CE
Dmd
RIIa
Motif
Other DBs
NCBI-GeneID:
116727282
NCBI-ProteinID:
XP_032430517
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Position
10:complement(5412078..5424638)
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AA seq
853 aa
AA seq
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MADKDSVEKYLENNPQFAKEYFDKKLRAESLSAAFSEPLDIKDTASFKDVNSVQEAAIIF
ELLQELQKQTTIEKNLHKVLQRTALILQADRVSYYICRSRNGIPELATCLFDVTPTSKYE
ANLVNPQSEIVIPTDMGIVGYTATSKKPQNVPDITKNTKFCDFVDKQTGYKTKCIMSYPM
VADKDCLGVIMVLNKIGADAFTPEDEKLFHKYMTFAQVISLQYHTAYMFNVESRRSQVLL
WSASKVFEELTDIERQFHKALYTVRTYLQSERYSVGLLDMTKEKEFYDEWPVKLGDVEPY
KGPKTPDGREINFYKIIDYLLEAKEEIKVIPGPPADHWALVSGLPTYVAENGFICNMMNV
AADDYFTFQREAVDESGFIIKNVLSLPIVNKKEEIVGVATFFNRKDGKPFDEYDEQITEA
LTQFLGWSVLNCDTYDRLNRMEWRKDIAQEMLMYQTKCTSDEMQSILNTKEKFDAEPEDC
DQKEMYKLLRANCPPADNVDGENLYNFGFSDFPVTEHGLIKAGIRIFFELGVVEKFKVPP
ETLTRWMYTVRKGYRAITYHNWRHGFNVGHTMFCLLQTGRLRKYYSDLDAFAMVAAAFCH
DIDHRGTNNLYQTKSASPLAKLHGSSIMERHHLEYSKTLMGEETLNIFCNLQKRQFETVQ
HLFDVCIIATDLALYFKKRTMFQNIVNATEPMADEKEAIAHISNNPIRKEIIMAMMMTGC
DLSAITKPWEVQSKVALMVAAEFWEQGDLERNVLDQQPIPMMDRNCAEQLPKMQCGFIDF
VCSFVYKEFSRFHKEITPMFDGLNNNRAHWNELAEVYNAKMKAIEDEKKKLEEEEAKKAG
GGEGGKSKTCTIC
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaggacagcgtggagaaatacttggagaacaacccgcagttcgccaaagag
tacttcgataagaagttgcgtgccgagtccctgagcgccgctttctccgagcccctcgac
atcaaggacacagcctcgtttaaggatgttaactcggtgcaggaggccgccatcatcttc
gagctgctccaggagctccagaagcagacgaccatcgagaagaacctccacaaggtgctg
cagagaaccgctctcatcttgcaggccgacagggtcagctactacatctgccgctccagg
aacggaatccccgagctcgcaacctgcctcttcgacgtgaccccgacctccaaatacgag
gccaacctggtgaacccgcagagtgagatcgtgatccccactgacatgggaatagtgggc
tacacagccacttccaagaagccccaaaacgttccagacattaccaagaatacaaagttc
tgcgactttgtggataaacaaactggatacaagaccaaatgcataatgtcctaccccatg
gttgctgacaaagactgccttggagtcatcatggtgcttaacaaaataggagctgatgca
ttcacgccagaggatgagaagcttttccataagtacatgacttttgctcaagtcatttct
ctgcagtatcacacagcctacatgttcaatgtagagtccaggaggagtcaggtgctgctc
tggtctgccagcaaagtttttgaagagttgacagacattgagaggcaattccacaaagct
ctctacaccgtgaggacctacctgcaatctgagcgttactcagtggggctgttggacatg
actaaagaaaaggaattttatgacgagtggcctgtgaaactaggagatgtggaaccctat
aaaggaccaaaaacaccggatggcagggaaatcaacttttataagatcattgactacctc
cttgaagccaaagaagaaattaaagtcataccaggtccacctgcagatcactgggctctg
gtcagcggactgccaacttatgtggcagaaaacggctttatttgcaacatgatgaatgtt
gctgcagatgactacttcactttccagagagaggcagtggatgagtcgggtttcatcatc
aagaacgtcctgtcgctgcccatcgtcaacaagaaggaagaaattgtgggcgtcgccacc
ttcttcaacagaaaggatggcaaaccgtttgacgagtatgacgagcagatcaccgaggcc
ctgacacagttcctggggtggtcggtgttgaactgtgacacctacgacaggctgaaccgt
atggaatggaggaaagacattgcccaggagatgctcatgtaccaaaccaaatgcacctcg
gacgagatgcagtccattctgaacaccaaggagaagtttgatgctgaacctgaagactgt
gaccagaaggagatgtacaaattactgagagcaaactgcccacctgccgacaacgtggac
ggagaaaatctgtacaacttcggcttcagcgacttccccgtcacagagcacggcctcatt
aaagctggcatccgcatattctttgagcttggggtggtcgaaaagtttaaagttccccca
gaaactctgactaggtggatgtatactgtgagaaagggttaccgtgccattacataccac
aactggaggcatggcttcaatgtaggccacaccatgttctgtctactgcagacagggaga
ctgaggaagtactactcagatctagatgcctttgccatggtggctgcagctttctgccac
gatatcgaccacagaggaacaaataacctctaccagacaaagagtgcatctcctctggcc
aaacttcacggctcctccattatggagagacaccatttggaatacagcaagacactcatg
ggagaggagactttgaacatcttctgcaatctgcagaagcgtcagtttgagactgtgcag
cacttgttcgatgtttgcattattgccactgatctggccctttacttcaagaagagaacc
atgttccaaaacattgtgaatgccacagaaccaatggcagatgaaaaagaggccatcgcc
cacatttctaacaaccccatcaggaaggaaattatcatggccatgatgatgacaggctgc
gacttgtcagccatcaccaaaccctgggaggtgcagagcaaggtggctctgatggttgca
gctgaattctgggaacagggcgatttggaaagaaacgttttggaccagcagccaattccc
atgatggacagaaactgtgcagaacagctacccaagatgcaatgtggtttcatcgacttt
gtgtgctcatttgtgtacaaggagttctccaggttccacaaagagatcacacccatgttc
gacggtctgaacaacaacagggcacactggaacgagctggctgaggtgtacaatgcaaag
atgaaggctattgaagatgaaaagaagaagctggaagaggaggaagccaagaaagctggt
ggtggtgagggagggaagtcgaagacctgcaccatctgttag
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