Xiphophorus hellerii (green swordtail): 116727311
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Entry
116727311 CDS
T07363
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116727311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116727311
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116727311
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
DUF6288
Motif
Other DBs
NCBI-GeneID:
116727311
NCBI-ProteinID:
XP_032430566
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All DBs
Position
10:9812268..9832504
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AA seq
299 aa
AA seq
DB search
MSTYTVTLNGPAPYGFRLQGGKDFNMPLTISRITPGSKAAGGTLTQGDIISSIDGINTDG
MSHMDAQNKIKSAINKLTLTMQKSRRPVPVPTAAPRMDSPMPVIPHQKQDIKKAQDQVIA
NTAANVEYTPSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAI
AGQSQAKGHDSEEAGSPLAGVLPIKEPVVDCASPVYQAVIRAPDTNQDMSEWARRAANLQ
SKSFRILAHITGTEYLQDPDEEALQKSRERFESEVKGPRFAKLKNWHHGLSAQILNVQE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgtacacagtgactctgaacggcccggctccgtatggcttcaggctacaggga
ggaaaggacttcaacatgcccctcaccatctccaggataactcctggcagcaaggcagca
ggcggcaccctgacccagggcgacatcatctcatcaatcgacgggatcaacaccgatggg
atgagccacatggacgcccagaacaagatcaagtcagcaatcaacaaacttacactcacc
atgcagaaatccagacgccctgtaccagttcccacggcagctccaagaatggactcaccg
atgcccgtcatcccacaccagaagcaagacataaaaaaggcgcaggatcaagtcattgcc
aacacagctgcaaacgtggagtacacccccagcttcaaccccatcgctttgaaagactct
gccttgtccacccacaaacccatcgaagtgaggggccccggcggaaaggccactatcgtt
cacgcccagtacaacacaccaatcagcatgtactcacaggacgctatcatggacgccatt
gcaggacagtcgcaggccaaaggacatgacagcgaggaggccggctctcctttggctgga
gtcctcccgatcaaggagcctgtggtggactgtgcatctcctgtgtaccaagccgtgatc
cgggcaccagacacaaaccaggacatgtctgagtgggctcgccgtgccgccaacttgcag
tcgaaaagcttcaggatcctggctcacatcactggcactgaatacctgcaagatccagat
gaggaggcactgcagaaatcaagagagcgattcgagtcagaggtcaaagggccgcgcttc
gccaagttgaagaactggcaccacggattgtctgcacagatcctcaacgtccaggaataa
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