Xiphophorus hellerii (green swordtail): 116727315
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Entry
116727315 CDS
T07363
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116727315 (tut1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
116727315 (tut1)
2.7.7.52 RNA uridylyltransferase
116727315 (tut1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
116727315 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_PARP14_3
RRM_1
RL
TUTase
zf-met
zf-U1
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
116727315
NCBI-ProteinID:
XP_032430574
LinkDB
All DBs
Position
10:23279398..23300440
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AA seq
777 aa
AA seq
DB search
MSSDSDIQTTTRGFCCKLCNVNLPNLPSVEQHVKGRKHQTLSAVRSTRKSHEEHSVFVSG
IKPQVSSTDLTEYFEQFGAVSDVIVDKDKGVYAIVQFSETESIQATLACVEHRLKGLKLR
VKPREKKEFKLIPKKKNDPQSLQQIFDRLKPELCQLSSVDAQMKLLVERLQLGENEKKAR
VLVVQLLQEVFVEFFPDSQILLFGSSVNTFGIHSCDLDLFLDLENTKTFQARAKTSTEQA
GEGVSDDGRSEDSILSDIDLSAASAAEVLELVATILKRCVPSVHKVHVVSTARLPVIKYH
HRELNLHGDITLNNRLGVRNTRFLQLLSGLEERLRPLVFTLRYWAKQKQIAGNPSGAGPL
LNNYALTLLVVFFLQNCRPPVLPTVDQLRDMACEEEECVIDGWNCTFPSQPIAVQPSQNT
QDLCSLLAGFFSFYAQFDFPSSVISLRQGSALPITDFLSQTKDGEAPPEGPPSEPKLGPL
NLLDPFELSHNVAGNVNERSLRSFQKACQEADKFCHSLRYQNKSAKGKSWGLARLLAPLG
HAQQAHPERLVITVPFRSAALPEGLRGELHSAGDGFRLLWSRKVCSAVEVVLKTVLRCEL
EASTASGAEEMETTLDDSTQSVESHSDGSPQRVGAKRPLSSGSDESATPPGKRPRLARTA
KDDFPPWVCVQKHAVWVGRRKVRRELVKGPDSRPEGSCLELESQVTASIADKEPELKDPL
EFKVCPQTVGGTENTRLLLNVEPGSDKAGVFHDFFHFLEVFVPKMVETVLESGAGSA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacagcgatatacaaacgacaaccagagggttctgctgcaaactgtgtaac
gtcaacttaccgaacttgccgagtgtggagcagcatgtgaaggggcggaagcatcagacg
ctgagcgccgtccgctccaccaggaagagccacgaggagcacagcgtgttcgtcagcggc
atcaaaccacaggtctcctcgaccgacctgaccgagtactttgagcagtttggggccgtc
tctgacgtcatcgtggataaggacaagggggtgtatgccatcgttcagttcagtgagaca
gagagcatccaggcgactctggcctgcgtcgagcaccgactcaaaggcctgaagctgcgg
gttaaacctcgggaaaagaaggagttcaaactgattcccaagaagaagaacgatcctcag
agcctccagcagatctttgaccgactcaagcctgagctgtgtcagctttcttcggtggat
gcccagatgaagctgctggtggagcgactccagctgggagagaatgaaaagaaggccaga
gtgttggtggtccaactcctgcaggaggtctttgttgaattctttccagacagtcagatt
ttgctctttggttcatccgtcaacacttttggcattcactcgtgcgacttggacctgttc
ctggacctggaaaacaccaagacgttccaagcacgggctaagacctccacagagcaggca
ggcgaaggcgtgtcggacgacggccgctcagaggactccatcctgtccgacatcgatctg
tccgcggcgtctgcagccgaggtcttggagctcgtggccaccatcctgaagcgctgcgtc
cccagcgtgcacaaagtccatgtggtcagcaccgctcgcctccccgtcatcaagtaccat
caccgcgagctcaacctgcacggagacatcacgctgaacaacagacttggagtgaggaac
acccgcttcctgcagctgctgtcggggctggaggagaggctgaggcctctggtgttcacc
ctccgatactgggccaagcagaagcagatagctggtaaccccagcggcgctggcccgctc
ctcaacaactacgccctgacgctgctggtcgtcttcttcctgcagaactgccggccgccg
gtgctgcccacagtggaccagctcagagacatggcctgtgaggaggaggagtgtgtgatt
gatggctggaactgcaccttccccagtcagcccatcgcagtgcagcccagccagaacact
caggacctgtgttctctgctcgccggcttcttctccttctacgcacagtttgattttccc
agcagcgtcatttccctcaggcagggcagcgcgcttccaatcaccgacttcctgtcgcag
actaaagacggcgaagcaccgccggaggggccgccctccgagcctaagctgggccccctg
aacctgttggaccccttcgagctctcccacaacgtggcggggaacgtgaacgagcgctcg
ctgcgcagcttccagaaggcgtgccaggaggccgacaagttctgccacagcctgcgctac
cagaacaagagcgccaagggcaagtcgtggggcctggcccgcctgctggccccgctaggc
cacgcccagcaggcccacccggagcggctcgtcatcaccgtccccttcaggtccgctgcc
ctcccagaggggctccgcggggagctgcactcggcaggagacggtttcaggctgctgtgg
tccaggaaggtctgctccgccgtggaggtggttctgaagaccgtcctcaggtgtgagctg
gaggcttccactgcatccggggcggaggagatggagaccacgcttgacgacagcacccag
agcgtggagtctcacagcgacggcagccctcagcgtgtgggcgccaagaggcctctgtcg
tccggcagcgacgagtcagcgacgcctcctggcaaaaggccgagattggcgagaacggcg
aaggacgacttcccgccctgggtctgtgtccagaaacacgcggtgtgggtgggcaggcgg
aaggtgagacgggagctggtgaaaggtccggacagcagacctgagggcagctgcctggag
ctggagtcccaggtcacagcgtccatcgccgacaaagagccggagctaaaggaccccctg
gagttcaaggtctgcccccagacggtgggtgggacggaaaacaccaggctgctgctgaat
gtggagccaggaagtgacaaggcgggggtttttcatgacttctttcacttcctggaagtg
tttgttcccaagatggtggagacggtgctggagagcggagcgggcagcgcttag
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