Xiphophorus hellerii (green swordtail): 116727346
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Entry
116727346 CDS
T07363
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727346
Membrane trafficking [BR:
xhe04131
]
Endosome - Golgi transport
Others
Others
116727346
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
116727346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
116727346
NCBI-ProteinID:
XP_032430621
LinkDB
All DBs
Position
10:26281118..26400505
Genome browser
AA seq
1538 aa
AA seq
DB search
MLRGLGVAPAPSGHKWKFHCSVGVDCSNAEPCCIWLAVLRGVSNHTSLRPRAVTPTRRTG
SRIKNHHHLSWTKGQNAGIVSSDKNGSNQLPSTEVAAMSQEGPRTIVLQKNSQGFGFTLR
HFIVYPPESALQSLKDKENKNLPGTVESQQACLEPMDTIFVKSVKENGPAQQAGLCIGDR
LVKVNGESILGKTYSQVITLIQNSENLLELTIMPKNEDVLQLVSVYSQNVNSKGVKPYSG
ETQNLPEPLHLCSLASGVSSAMQHPTSNPLDNWPHNGRSAVSPLENQAPATSTSTSGQPQ
APEDSSRHFAPPWQHQDCNYASLNAFDFHFANHNAAITSATLPPPRRSRLQASSRAHSDA
LYHQALSDWYYSQAETAEHISPRHVSVSQDYLAEPHLGSAPRPRFIPSPPTFAEHHRRET
FLHHQRAAGAVHDSYWQGDCGAGLGTASNSCSESLLAAYAEYEHNYGRSVETLAEASALV
SQHYEQTSPNSHMTCKREQKKQKAPEGHEHKTTVLASPTVSLGHMQSAQQVAEPQTRRLE
EEEVVDYRSYSPSFYHKEGHLLQQAHSFREPAYSGPHLNWGSGTRRESAFSCLQSTPAPR
TLEEKTKQLRDDREVISSVSPVQEVVLRQRPLFTCQTPFQANSTPTVSPEASGWIPAART
IPVPQETGSSRSVNSSLAHAFNSLSSIPFIDYPVSPSVDHQASRLGPSVSADSVVSSGTG
VTFTSVAPSSVSPPVRLHSQDFRSFKSRRSSYLLAITTERSKSCDEGLNTYRDESRVFSK
LPKRVKSFFTDGSLNSLRAQEDPRSKRHSTSELGIITFSDVRKEGWLHYKQVLTEKGKKL
GGSMRPWKRVFSVLRHHSLFLYKDKREAVLHGAGAGSSQDEHPPVSIRGCLIDIAYSGTK
RKHTLRLTTQDFCEYLLQAEDRDDMLAWIRVIRENSKSDNEEIGQVLINKKLNDYRKHSL
TDNKPDSSPRAHRMVPDFLLAKTDDTSGNRTSRADDNKALWGINLMKKTKKPGCPKAFGV
RLEDCQPAVNHKFVPLIVEICCGVVESSGLEYTGIYRVPGNNAMVSSLQEHLNKGLDINT
AEERWQDLNVISSLLKSFFRKLPEPLFTDDKYNSFIDANRIEVADDRLKTMKKLIHDLPD
YYYHTLKFLVSHLKMVADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIV
ETLILHHDWFFCDGELDQDNMVPEGKQDIQPVPNIDHLLSNIGRPGMPGDASDSTTSDSI
KLKMSSTSKKDLNARDFLPKSIISAVTRKRKKCLSTHLAVSSGDEDSDHELVKNTSYGER
DEGPLDGRGPQEPVQGEHTCSKKEKRHGVVHVQTSEEGKGEEETAVRKGAAGGGGSFLGS
QQSHGKYPKPPAATSPPSHTKIPSDVKERPSVPFWISPSCPPSLQTSSCLTEWSQAASTG
RPARTRATSINLELGQGQEIGRGQRSDGVKVIRAGEVLAAQCGFLQQRSVTAGSAQHPFS
AFSSTSGWTDQRSSSVVLRSTPDSQAKRRAWRRHTVVI
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggggattgggtgttgctccagccccatcaggccacaagtggaaatttcactgt
tctgttggggtggactgtagtaacgctgaaccctgctgcatttggctggcagttctgagg
ggggtatccaatcacacatcacttcgtccaagagcagtcacaccaacaagaagaaccggt
tccaggatcaaaaatcaccatcacttgtcttggactaaaggccagaatgctgggattgtg
tcatctgacaaaaacggaagcaaccagctgccatcaactgaagtggcagccatgtcgcag
gaaggcccacggaccattgttctccagaagaactcacaaggtttcggcttcactttgcgc
cacttcattgtgtacccaccagagtcggccctccaaagcctcaaggataaagaaaataaa
aatttaccaggaacagtggagagtcagcaagcttgtttggagccaatggacaccattttt
gtgaaaagtgtgaaagaaaatggccctgctcaacaagctggactgtgtattggagaccga
ctggtgaaggttaatggggagagcattctggggaaaacctattctcaggttatcacactc
atccaaaacagtgagaaccttttggagctcactattatgccaaaaaatgaggatgtgttg
cagttggtaagtgtgtactcccagaatgtcaactccaaaggtgttaaaccgtactcaggt
gagacccagaaccttccagaacctctgcatctctgctccctggcctctggtgtgagctcc
gccatgcagcatcccacttccaaccctctggacaactggccgcacaatggcagaagtgcc
gtctcaccactggagaaccaagcccctgctacctctacctccacctctggccaaccacaa
gctccagaggattccagcagacattttgctccaccatggcaacaccaggactgcaattat
gcaagcctaaatgcatttgacttccattttgctaaccataatgctgccatcacctctgca
acgctgcctccacctcgaaggagcagactgcaggcctcttcacgtgctcacagcgatgca
ctctaccaccaggctctgtcagactggtactacagccaagcagagacagcagaacacatt
tccccccgacatgtaagtgtatctcaggactatctagccgaaccgcacctgggttcggca
cccaggcccagatttatacccagccctccgacctttgcagaacaccacagaagagaaact
ttccttcatcatcagcgagcagcaggtgctgtgcatgactcctactggcaaggagactgc
ggcgctggattgggtactgctagcaactcatgctcagagagtctgttggcagcctatgct
gaatatgagcacaattatgggcgctccgtggaaacactggcagaggcctcggctctggtc
tcacaacattatgaacagacttcaccaaattcccacatgacatgtaaaagagaacagaag
aagcagaaggctccagaaggacatgaacataaaactacagtgttggcttcccccaccgtg
tcactcggccacatgcagtcagctcagcaggtggcggagccccaaacaagacggctggaa
gaagaggaagtggtggactacagaagctacagcccctcattttaccacaaagagggccat
ctcctccagcaggcccactctttcagagagcctgcttacagtggccctcacctcaactgg
gggtctggcaccagaagagagagtgccttttcctgtctccagtctactcctgcacctcgg
actttagaggagaagacgaagcagctaagagatgacagagaggtcatctcctctgtttcc
ccagttcaagaggtagtcctgaggcaaaggcccctttttacctgtcagacaccctttcag
gctaactccactcccaccgtatcaccggaagcatctggttggatccctgcagccagaaca
attcctgtccctcaagaaactgggtccagccgcagcgttaatagtagccttgcccatgcc
tttaattccctctcctccattcccttcatagattatcctgtcagtcccagtgttgaccac
caagccagcaggcttggtcccagtgtgtcggctgactctgttgtgtccagcgggactggg
gtcaccttcacctctgtggccccgtcctccgtctccccccctgtccgacttcactctcag
gacttcagaagctttaaaagtcgccgctcctcttacttgctggccatcaccactgagcga
tccaagtcctgcgatgaaggactcaacacttacagggatgagagccgagtcttctctaaa
ttaccaaagagagtcaagagctttttcactgatgggtctttgaacagtttgcgagcccag
gaggacccccgctcgaagcgccactccacatcagagctgggtatcatcacctttagtgac
gtccggaaggagggctggctacactacaaacaggtcctcacagagaagggaaagaagcta
ggaggcagcatgcggccttggaaacgtgtcttcagtgtgcttcgccatcactcccttttc
ctttacaaagacaagcgtgaagctgtgctgcatggcgccggggcaggcagcagccaggat
gaacatccaccagtcagtattcgaggctgcctgattgacattgcctacagtggaaccaaa
cgaaagcacaccctgaggctgaccacgcaggacttctgtgagtacctgctgcaggctgaa
gaccgggacgacatgctggcatggatcagggtcatcagagagaacagcaaatcagataat
gaggagattggacaagttctaatcaacaagaagctgaatgactacaggaaacacagcctg
acagacaacaagccggattcctcccccagagcccatcgcatggtgcctgacttcctcctg
gctaaaacagacgatacttcagggaaccgaacctcaagagctgatgacaacaaggccctg
tggggtatcaacctcatgaagaaaacaaagaaaccaggctgtccgaaagcctttggggtg
agactggaggactgccagccagctgttaaccataaatttgtccctctgattgttgaaata
tgctgcggtgtggtggagtcctctggtctggagtacactgggatctaccgcgtgcctgga
aacaatgccatggtgtcaagtctgcaggaacacctcaacaagggcctggacatcaacact
gctgaagagagatggcaagatctgaatgttatcagcagcctgctgaaatcattcttcaga
aaactgccagagcctctgttcactgacgacaaatataacagcttcattgatgccaaccgg
atagaagttgctgatgacagactgaagaccatgaaaaaactgatccatgacctcccagat
tattattaccatacccttaagttcctggtgagtcacttgaagatggtggcagaccactct
gaaaagaacaagatggagccaagaaacctggctctggtgtttggtcccactctggtgagg
acgtcagaggacaatatgactgacatggtcacccacatgcccgaccgttataaaatagtg
gaaacactcatccttcatcatgactggttcttctgcgacggtgagctggatcaggacaat
atggttcctgagggtaagcaggacattcaacctgtccctaacatcgatcacctgctgtca
aacattggcaggccgggcatgcctggggatgcttcagattccaccaccagtgactcaatt
aaactgaagatgtcttccacttccaagaaagatctgaatgccagggacttccttcccaag
tccatcatctctgctgtgacccgcaaacgtaaaaaatgcctcagcacccatctagcagtc
agcagcggcgatgaggactctgatcatgaactggtcaaaaacacaagctacggagagaga
gatgaaggtccccttgatggaaggggaccgcaagaaccggtccagggggaacatacctgc
tccaaaaaagaaaaaagacatggagtggtacatgtgcagacatctgaagagggaaaagga
gaagaagaaacagctgtgaggaagggagcagccggggggggaggttctttccttggttct
cagcagagccacggcaaatacccaaaacctccagcagcaacaagcccaccatcacatacc
aagattccgagcgacgtcaaagaacgtcccagcgttccattctggatctcccccagctgc
cccccctctttgcagacctccagttgccttacagagtggagtcaggcagccagtacaggc
aggcctgctaggaccagggccacctccattaacctggagctgggccagggccaggagatt
ggcagaggtcagagatcagatggggtaaaggtgatcagagctggggaagtgctagcagct
cagtgtggatttcttcaacagagatccgtcacagcaggctcagctcaacatcccttttct
gccttctcctctacttcaggatggactgatcagcgatcctcctctgtggtgttaaggtcg
actccagattctcaagccaagaggagagcatggcgtcgccacactgtggtcatttaa
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integrated database retrieval system
