Xiphophorus hellerii (green swordtail): 116727354
Help
Entry
116727354 CDS
T07363
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116727354 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xhe03051
]
116727354 (psmc5)
Proteasome [BR:
xhe03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116727354 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
PRS7_OB
nSTAND3
RuvB_N
TIP49
AAA_18
AAA_3
AAA_28
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
ATPase
IstB_IS21
AAA_17
PhoH
AAA_24
AAA_7
DUF815
AAA_25
Sigma54_activat
FapA
bpMoxR
DUF5906
ABC_tran
RNA_helicase
AAA_11
Zeta_toxin
DivIC
AAA_19
TsaE
HR1
APG6_N
Motif
Other DBs
NCBI-GeneID:
116727354
NCBI-ProteinID:
XP_032430633
LinkDB
All DBs
Position
10:4516169..4521213
Genome browser
AA seq
406 aa
AA seq
DB search
MEVDGTDQMETGEFKGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagacggaaccgatcaaatggagacaggggagtttaaaggtgggtcaggtctc
cggcagtactacttatcgaagatagaagagctacagctgacggtgaacgataagagccag
aatctgagacgtctgcaggcgcaaaggaatgaactcaatgccaaagtgcgtctgctccgt
gaggagctgcagctgctgcaggagcagggatcctacgtgggggaagtggttcgggttatg
gacaaaaagaaagtgctggtgaaggtacatcctgaggggaaatttgttgtggacgtggac
aagaacattgacatcaatgatgtaactccaaattgccgcgtggctttgcgtaacgacagc
tataccctacacaagatcctgcccaacaaagtggaccctctggtttccctgatgatggtg
gagaaggttccggactccacctatgaaatgattggtgggctggacaaacagatcaaggag
atcaaagaagtcatagagctgccggtgaagcacccagagctgtttgaggctttgggaatc
gcacagccaaagggtgtgctgctgtatggaccaccaggaactgggaagactctgctagcc
agagcggtagcccaccacactgactgcaccttcatcagggtctccggctctgaactggtc
cagaaattcatcggagagggcgctcgcatggtgcgtgagctgttcgttatggcgagggaa
cacgccccctccatcattttcatggacgagatcgactccatcggctcgtcccgcctggag
ggcggctcgggtggagacagcgaggtgcagaggacgatgctggagctgctcaaccagctg
gacgggttcgaggccactaaaaacatcaaggtcatcatggccaccaaccgtatcgacatc
ttggactcggctctgctcaggccaggaaggatcgacagaaagatcgagttccctcctcct
aacgaagaggcccgtctggacatcctgaagatccactccaggaaaatgaatctcactcgg
ggcatcaacctgaggaagatcgcagagctcatgccgggagcctccggagccgaggtcaag
ggcgtctgcacagaggcagggatgtacgctctgagggaacggagagttcacgtcacgcag
gaggactttgagatggccgtggcgaaggtgatgcagaaagacagcgagaagaacatgtct
atcaagaagctgtggaagtaa
DBGET
integrated database retrieval system
