KEGG   Xiphophorus hellerii (green swordtail): 116727464
Entry
116727464         CDS       T07363                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03020  RNA polymerase
xhe04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116727464 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    116727464 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116727464 (polr3e)
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     116727464 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 116727464
NCBI-ProteinID: XP_032430798
LinkDB
Position
10:9440545..9450916
AA seq 686 aa
MASGDEDDPIIEEIDVYLSKSLADKLYLLQYPVRPGTMTYDDVSHLSAKIKPKQQRLELE
MAINTMSPNYCRSKGEQIALNVDGTSYDETNTYRAKMMDKQTFSSMQATTNTSRYAAAVF
RKGELHITPLTGILQMRPGFSYLDKADSKTREREAANEGGDSSQDEAEEEAKAITVRFAR
PESEQARQRRIQSYEFLQKKQAEEPWIHLQYHGAKDSRSDHEKQYLYCQSVDASQNSELV
KTPKEYLAMLMPPLAEEKIAKPVGPSNVLSMAQLRTLPLGEQVKTLMKNVKVMPFANLMG
LLASGTDQTSVLRCIQQVALLVQGNWVVKSDVLYPKNTCSAHSGVPAEVLCRGRDFVMWR
FTKERSVMRKEITSIIKLPPEDVKEFLEHVASPRVNRGWEFLLPTDADFIKKHPDVAHRQ
NMLWLGIQSKLEKVFNFSKEDFMPKNSPQPEPVHVSGAQRLKFAQERAQDNQASLQRDLD
GRRAGSSVQIKQEPNGDVAEELMDTSSSIHNGSVNGYSSATSPCLDHTNGGSPSNSLTPE
LQDFVTKTFQKHVVLTLNELKRLFNLYLASIPAGQNVFSSISDHMLQDAVLLCHCKQIMV
PFPAQSKLAPDERKVFGLWETGDNFDKHRRLLYDLFTKNHRVRRNVIQARLAQDLGDVSK
AEVDRLLHECCISSAGFWYLKGTLQS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggctagtggtgatgaggatgatcccattatagaagagattgatgtatatctttccaaa
agccttgcagataaactgtatcttctccagtacccggtgcggccgggcaccatgacctac
gatgacgtcagccatctgtccgctaagatcaaacccaaacaacagaggctggagctggaa
atggccatcaacacaatgagtcccaactactgtcgcagtaaaggagagcagatagcgctg
aacgtggacgggacgtcctacgatgaaaccaacacctacagggcaaaaatgatggacaag
cagacgttctcctccatgcaggccaccaccaacacgtccagatatgcggctgctgtgttt
cgcaaaggtgagctgcacatcacgcctctaacgggaatcctgcagatgagaccgggcttc
tcctacctggacaaagcggacagcaaaaccagagagcgcgaggcggctaacgaaggagga
gattcctctcaggatgaagcggaggaggaagccaaagcaattactgtgaggtttgcccga
cctgagtccgagcaggcccggcaaaggaggatccagtcctacgagttcctgcagaagaag
caagcagaggagccgtggatccacctgcagtaccacggtgccaaggacagccgatcggac
catgaaaagcagtacctgtactgtcagtcagtggacgcctcgcaaaactctgagctggtc
aaaactccaaaggagtatttggcgatgctgatgcctccactggctgaggagaaaatcgcc
aagcctgttggtcccagtaacgttctgtccatggctcagctccgcactctgccgctgggg
gagcaggtcaagaccctgatgaagaacgttaaggtgatgccttttgccaacctgatgggc
cttcttgcttcgggtactgaccagacatcagtgctgcgctgcatccagcaggtggcgctg
ctagtgcaaggcaactgggttgtaaagagtgatgttctgtatcctaaaaacacctgcagt
gctcatagtggcgttcctgccgaagttctctgtcgtggcagagactttgtgatgtggagg
ttcacaaaggagcgctcagtgatgaggaaggagatcacatccatcatcaaacttccccct
gaggacgtgaaggagttcctggagcacgtggcatctcctcgggtcaaccgaggctgggag
ttcctgctgcccactgatgcagatttcatcaagaagcacccagacgttgctcacagacag
aacatgctgtggctcggtatccagagcaagttggaaaaagttttcaacttctctaaagaa
gacttcatgccaaagaattcccctcaacctgagcccgttcatgtcagcggtgcgcagcgc
ctgaagtttgctcaggagcgagctcaagacaaccaggcgtcgctgcagagggacctggac
ggcagacgtgcaggaagcagcgtccagatcaaacaggaacccaacggcgatgttgcggag
gagctgatggacacttcttcctccatccacaacggttctgttaatggttactccagcgcc
acctccccctgcttggatcatactaacggagggagcccctccaacagcttgaccccggag
ctgcaggactttgtgacaaagactttccagaaacacgttgtgctgacgctgaatgagctg
aagagactctttaacctctacctggcttccataccggctggacaaaacgtcttcagctcc
atttccgatcacatgctgcaggacgctgtgctgctctgccactgcaagcagataatggtg
ccttttcctgctcagagtaaattagctcctgatgaaaggaaggtgtttggtctttgggag
acaggagacaacttcgacaagcaccgccgcctgctctacgaccttttcacaaagaaccac
cgggtcaggaggaatgtgatccaagccagacttgctcaggatttgggcgacgtgtctaaa
gccgaagtcgatcgactgcttcatgagtgctgcatcagcagtgcagggttttggtacctg
aagggaacgttgcagtcatga

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