Xiphophorus hellerii (green swordtail): 116727465
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Entry
116727465 CDS
T07363
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727465
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116727465
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116727465
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
116727465
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
Motif
Other DBs
NCBI-GeneID:
116727465
NCBI-ProteinID:
XP_032430802
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Position
1:16481817..16539000
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AA seq
508 aa
AA seq
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MATNREQQVGHLTGFPPAVYPFPFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPDAFDD
QTECNENAPPPPPPPPPPALVVKQEAEDEDDSWGTENCSEPSPEEEDEDDDDDLGDEERD
RGSDSDGEPWGVLDNLDGSRKGLVGRAQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggagcagcaggtgggtcacttgaccggcttcccgcctgctgtctac
cccttccccttcaactccatgagaagtcactccccctttgacctgctagccaacagcagc
ctgtttggaagatttggggctgacctgccaaaggagatggctgctctctcggtggagacc
cagagtaccagctcagaggagatggtacccagttcgccatctccccctcccccacctcgt
gtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactacggggtcagt
tcctgcgagggctgcaagggtttcttccgtcgcagtatccaaaagaacatggtgtacacc
tgtcaccgagacaagaactgccagattaacaaggtcacacgcaaccgctgccagtactgc
aggctgcagaagtgctttgaggtcggcatgtccaaggaagcggtgcgcaatgacagaaac
aagaagaagaaggatgtgaaggaggaggtagtgctaccagagagctatgagctaagtgga
gagcttgaagaactggtcaacaaagtcagcaaagctcaccaagaaacatttccttcactt
tgccagctgggaaaatacaccaccaactctagctcggaccaccgtgttcagttggatctg
ggtctctgggacaagttcagtgagctctccaccaaatgcattatcaagattgtggagttt
gccaagcgcctgccaggcttcaccaccctcactattgccgaccaaatcactctgctgaag
tcggcctgcctggacattctgatgctgagaatctgcacacgctacacccctgaacaggac
actatgaccttctcagacggcctgactttgaaccgaactcagatgcacaacgctgggttc
ggaccactcacagacctggtgtttgcctttgccggccaacttctacccctggagatggat
gacactgaaactggtctcctcagcgccatctgcctcatctgtggagatcgcatggatctc
gaggagccagaaaaagtagataagctacaagagcctctactagaggctcttaagatctac
gcccgtcgccgtcgccccaacaagccccacatgttccctcgcatgttgatgaagatcact
gacctcagagggatcagcacaaaaggtgcagaaagagccatcactctgaagatggagatc
cctggcccgatgcctcctctgatcagggagatgcttgagaaccccgacgcgtttgacgac
caaacggagtgcaacgagaacgcgccgcccccgccaccgccgccgccgcctccagcgttg
gttgtgaagcaggaggctgaggacgaggacgacagctggggcacagaaaactgcagcgag
ccatcaccagaagaggaggatgaggacgacgacgacgacttgggagacgaggagcgagac
cgaggctcggacagtgacggggagccctggggagttttggataacttagatgggtcaagg
aaaggccttgtggggagggcacagtaa
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