Xiphophorus hellerii (green swordtail): 116727539
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Entry
116727539 CDS
T07363
Symbol
hoxc11
Name
(RefSeq) homeobox protein Hox-C11
KO
K09296
homeobox protein HoxC/D11
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727539 (hoxc11)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116727539 (hoxc11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
FTZ
TFIIA
TAF4
Motif
Other DBs
NCBI-GeneID:
116727539
NCBI-ProteinID:
XP_032430927
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Position
1:16638466..16643043
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AA seq
325 aa
AA seq
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MFNSVNLGNFCSQTRKDRTSEFGDRTGCASNIYLPSCTYYVPEFSAVSSFLPQAPSRQIS
YPYSTNLSQVQPVREVSYGLDPASKWHHRSNYASCYSGEDLVHRDCLPPSTMTEMLMKNE
SVYSHHHHHHAHPGSNHPSTGFYSGVGKNNVLPQGFDRFFETAYCSSTDNQSDNCLQKGE
GGKLESDSQQQQQQQQQQQQQQDATAAISGVPEPGKDPDDEEEHTNSGSCTSSSATAKDG
NASKSSHSSVPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIW
FQNRRMKEKKLSRDRLQYFSGNPLL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtgaatctgggcaacttctgctcccagacacgcaaagaccggacatcc
gagtttggggacaggacgggctgcgcttccaacatctacctccccagctgcacctactac
gtccccgagttttccgccgtctcctcgtttcttccgcaggccccttcgcggcaaatcagc
tacccttactccacgaatctgtctcaagtgcagccggtgcgggaagtttcgtacggcttg
gaccccgccagcaaatggcaccacaggagcaactatgcgtcgtgctactcgggagaggat
ctggtgcatagagactgtcttcctccatccaccatgacagaaatgctcatgaagaacgag
agcgtgtacagccaccaccatcaccaccatgcccacccgggatccaatcacccttccacg
ggcttttattctggcgtggggaaaaacaacgtcctcccacaaggcttcgaccgctttttc
gagaccgcatactgcagcagcacggacaatcagtcagacaattgtttacaaaagggcgag
ggagggaagctggaaagcgactcgcagcagcagcagcaacaacagcaacagcagcagcag
cagcaggacgccacagccgctatatctggagtcccggagccggggaaagacccagacgat
gaggaggaacacacgaattcaggctcctgcacctcttcttccgccacagccaaggacgga
aacgccagcaagagcagccactcgagcgtccctcgaacaaggaagaagcggtgtccctat
tccaagtttcaaattcgagagctggagcgggaattcttcttcaacgtttacatcaacaag
gagaagaggctccagctttcccgaatgttgaacctcaccgaccgccaggttaaaatctgg
ttccagaacagaagaatgaaagagaagaagctgagcagagatcgcttgcagtacttctct
ggaaaccccctgttgtga
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