Xiphophorus hellerii (green swordtail): 116727563
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Entry
116727563 CDS
T07363
Symbol
hoxc4
Name
(RefSeq) homeobox protein Hox-C4 isoform X1
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727563 (hoxc4)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116727563 (hoxc4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
SR-25
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
116727563
NCBI-ProteinID:
XP_032430958
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Position
1:16671518..16704768
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AA seq
324 aa
AA seq
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MIMSSYLMESNYIDPKFPPCEEYSQNNYIPEHSPEYYSRARDTGYQHHHQELYPPPRASY
QERQYNCASIPEPDTPRGHGIPHSAHLLTGKGQPASCETPQLSMSPATPPAAASACNQAT
PEHPNSTVSSKQPVVYPWMKKIHVSTVNSGYNGTEPKRSRTAYTRQQVLELEKEFHYNRY
LTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRSSSSSSSSSSGSNTGSA
AGGVAAVSATNTGAPDELTGAQHGEDITRFLDKEKPDFVQKMSEEISQKLLWAPQVPSRI
SFQLQSSAIGGLAHVTKVPPSVPG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagctcgtatttgatggagtctaactacattgatccgaaatttcctccatgc
gaggaatattcgcaaaacaactacatccccgagcacagtccagaatattacagccgcgca
agggacactggctaccagcatcaccaccaggagttataccctcctccgcgggcgagctac
caagagcgccagtataactgtgcaagcatccccgagcccgacacgccgcggggacacgga
ataccccactccgcacacctgctgacgggaaagggccagcctgcgtcatgtgagacccca
cagttgtccatgtcccccgccaccccgccggccgcagcctccgcctgcaaccaagccacc
ccggagcatcccaacagcacagtctcctccaaacagcccgtggtgtacccgtggatgaag
aaaattcacgtcagcactgtgaactctggttacaatgggacggagccaaagcgatctaga
acagcttacacccggcagcaggtcttggaattggagaaggaattccactataaccggtat
ttaacccgacggaggcgcattgagatcgcgcacaccctggtgctctccgagcggcagatt
aaaatctggtttcagaaccgcaggatgaaatggaaaaaggatcacaggctgccgaacacc
aaagtgagatcctcctcctcttcctcgtcctcctcctccgggtccaacacaggctctgcg
gccggcggagtcgccgctgtctcggccaccaacactggggcccccgacgaactcacagga
gcacagcatggcgaggatattaccagattcctagataaggagaagccggacttcgtgcag
aaaatgtctgaagaaatatctcaaaagcttctttgggcaccccaagttcccagcaggatt
agtttccaactccagagctctgctattggaggactggcacacgtgaccaaggtacccccc
tctgttccaggttga
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