Xiphophorus hellerii (green swordtail): 116727594
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Entry
116727594 CDS
T07363
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04060
Cytokine-cytokine receptor interaction
xhe04217
Necroptosis
xhe04620
Toll-like receptor signaling pathway
xhe04621
NOD-like receptor signaling pathway
xhe04622
RIG-I-like receptor signaling pathway
xhe04623
Cytosolic DNA-sensing pathway
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116727594
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116727594
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116727594
04621 NOD-like receptor signaling pathway
116727594
04622 RIG-I-like receptor signaling pathway
116727594
04623 Cytosolic DNA-sensing pathway
116727594
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116727594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xhe04052
]
116727594
Cytokines and neuropeptides [BR:
xhe04052
]
Cytokines
Interferons
116727594
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Maf_flag10_N
Motif
Other DBs
NCBI-GeneID:
116727594
NCBI-ProteinID:
XP_032430998
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Position
10:complement(14056981..14059630)
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AA seq
180 aa
AA seq
DB search
MLSRIFFACIFLCLFCACSPLSCRWMEHKFRQYSTNSLTLLDMMAYHYVNQDPEVNIAAF
PYPLYHQASGASAEAKLAFTVQVLKEVSALFEEDDSSSSWQEVTMEHFLNVVNKQADELQ
LCAGNPKRPNRRLHIYFKRLSNSVFGQMGHSAEAWELIRREIKLHLIRADHLVSSLFISN
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcagaattttcttcgcctgtatttttctctgtctgttctgcgcatgctctccg
ctgagctgcaggtggatggagcataaattcagacagtacagcacgaactcattaactctg
ctggatatgatggcttaccattacgtaaatcaggaccctgaggtgaacattgcggcattc
ccttatcctctctaccaccaggcttcaggagcatctgcggaggctaaacttgccttcact
gtccaggttctgaaggaggtttctgccctgtttgaggaagatgacagctcttcatcatgg
caggaggtgacaatggagcactttctcaatgttgtcaacaaacaggctgatgaactacag
ctctgtgctgggaacccaaaaaggccaaacaggaggctgcacatatactttaagagactc
tcaaacagcgtgtttggacagatgggccacagtgctgaagcctgggagttgatcaggagg
gaaatcaaactccatctaatcagagcggaccatttggtttcttctctgttcatctctaac
tga
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