Xiphophorus hellerii (green swordtail): 116727596
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Entry
116727596 CDS
T07363
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116727596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727596
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
116727596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
116727596
NCBI-ProteinID:
XP_032431000
LinkDB
All DBs
Position
10:complement(10148464..10234066)
Genome browser
AA seq
1487 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTQSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAEVQSGVAVSDGRWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSQRRDMTVFSDTYMGGLSADLHSSPLRLTSVSVREHHP
AFRGWITAVSINGSLVALDSSEGVTVTTVCGPDHQCQNGGVCSVVNNQAVCDCSDTGYQG
NDCSEEHSYTPGLANLMVGDQGKSRAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSF
KTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKV
TRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSN
NFMGCLREVVYKNNDVRLELSRLAKEGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVA
LNKWMAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTVKVDFFAIEMLDGHL
YLLLDMGSGTTKTKAIDKKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLD
DTLYLGGLPEDRGGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKP
SCSRELPKQCLSNPCQHNGNCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQ
LPVAMHTEAEDISLRFRSQRAYGILMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCT
ASKGPETIFAGSGLNDNEWHTVRVVRRGKSLKLTVDDLQTVEGQMAGDHTQLEFHNVETG
IVTEKRFMPIVPSNFIGHLQGLMLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPITFR
SRSSFVTLPTLQAYYSMHLFMQFKTTSPDGLILFNRGDGNDFIVIELVKGYLHYISDLGN
GAHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGG
VTKEMYRELPKLVHSREGFQGCLATLDLNGRLPDLLADALTTVGQVERGCEGPSTTCQED
SCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVIYTWPPNERPSTRAD
RLALGFSTQQKHAVLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDG
KYHVVRFTRSGGNATLQLDDLPVIERYPSGNNDNERLAIARQRIPYRLGRVVDDWLLDKG
RQLTIFNSQTTVRVGGGEQGSAMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSARLVGD
MPSSSITPQSSAAAGANRSDSAPSISDITTTTATNKKQVVTQTVDDLLVASAECPSDDED
IDPCDSSARPPPPDVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRD
EGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaatggcggtttgcgtttgggcagcagcccccctgctctttctggggctgtgc
ctgtgcagcgtagggggccaggctcaaggggaggtcctggagtttgggggcgtatccagc
cagtgggggcggtttccggtgtggaacgcctgttgcgagagcgtgctgagtttcagcctg
cggactcagagccaggagggcctgctgctctacctggatgacgagggcttctgcgacttc
ctggagttgctgcttctccacgggcacctgcgcctacgcttctccatcttttgtgctgag
ccagctgaggtgcagtcaggcgtggcggtgagtgatgggcggtggcatgcggtgcgtgtc
aagagggactggaggaacacctcgttggaggtggatgggcgactggagggatgggcagaa
gtgaagagtcagagaagagacatgacagtattcagtgacacatacatgggcgggttgtca
gcagatctccactcctcgccgctacgcctcacctcagtctcagtgcgggagcaccacccc
gcctttcgtggctggatcacagcagtgagcatcaacggctcgctggtcgcgctggacagc
tcagagggcgtcacggtaacaactgtctgcgggccggaccaccagtgccagaacggaggg
gtgtgcagcgtggtcaacaaccaggccgtctgcgactgctccgacaccggctaccaaggc
aatgactgcagcgaagagcacagctacactccaggtctggcaaacctgatggttggcgac
caaggaaaatccagagctcgtgaggagtatgttgccacctttaagggctctgagtacttc
tgctacgacttgtcgcccaaccccatccagtccagcagcgacgaaatcacgctgtccttc
aagacgctgcagcgcaacggcctgatgctgcacacgggcaagtcagccgactacgtgaac
ctggcactaaagaatggtgctgtgtcccttgtcattaatctcggctctggggccttcgaa
gccttggtggagcccgtcaacggcaagttcaacgacaacgcctggcacgacgtgaaagtc
acccgcaacctgagacagcactcaggcattggacacgctatggtgacgatctccgtggac
gggatcctgaccacgacgggatacacgcaggaggactacaccatgctgggctctgacgac
ttcttctacgtgggaggaagtcccagcacagcggaccttcctggttctcctgtcagcaac
aacttcatgggttgtctcagagaggtggtatacaagaacaacgatgtacggttggagctt
tcaagactggccaaagagggcgacccaaagatgaaggtcagtggtgtggtgtcctttaag
tgcgagagcgtggcaacgctggatccagtgacgtttgacaccccagagtcattcgtggct
ttgaacaagtggatggcgaagaaggcgggatccatttcgtttgacttcaggaccacagag
ccgaacgggctgatgcttttcagccatggcaaacccagacaacagcagcgcaaagacccc
cgcacccctcctaccgtcaaggtggatttttttgccattgaaatgctggatggtcacctg
tacctgctgctggacatgggatctgggaccacaaagaccaaggccatcgacaaaaaggtc
aacgacggggaatggtatcacgttgacttccagagagatggacgctcaggaaccatctcg
gtgaacagcgtgagaacggcgtacacggctccgggggacagtgagatcctggacctggat
gacacgctgtacctcggaggacttcctgaggatcgcggcggactcattttccccacagag
gtgtggacagccctgctgaactacggctacgtaggctgcatcagagacctgtttgtggac
gggcagagtaaagacatcaggcggcttgctgaggcccagcgggcggtcggagtgaagcct
tcgtgctccagagagctgcccaaacaatgcttgtccaacccctgccagcacaacggcaac
tgcagggagggctggaaccgctacgtctgcgactgctccggtactggatacctggggcgc
tcctgtgagcgagatgcgaccatcctctcctacgacggcagtaagtttatgaaggtacag
ctgcctgtggcgatgcacactgaggcggaggacatctcgctacgctttcgctcccagcgg
gcctacggcattctcatggcaaccacatcccggaactcggcagacacccttcgtctggag
ctggacggcggccgagtccgactcactgtaaacctagactgtatcaggataaactgtaca
gccagtaaaggcccagagacaatctttgctgggtcgggcctcaatgataatgaatggcac
acggtgagggtagtccgacgcggcaagagcctcaaactcaccgtggacgacctgcagact
gtcgaaggtcaaatggcgggtgaccacacccagctcgagttccacaacgtggagacgggc
atcgtgacggagaagcgcttcatgcccatcgtgccctcaaacttcatcggccacctgcag
ggcctgatgctgaacggcatgccctacatcgacctgtgcaagaacggcgacattgactac
tgtgagctcaacgccgtcatcggctacaagagcatcgtggctgaccccatcaccttccgc
tcccgctccagcttcgtcacgctgcccacgctgcaggcctactactccatgcacctcttc
atgcagttcaagacaacgtccccagacggtcttattctcttcaacaggggagacggcaat
gacttcatagtcattgagttggttaaaggctaccttcattacatctctgacctgggaaac
ggagcgcacttgatcaagggcaactccaacagtccgcttaatgacaaccactggcacaat
gtgcacatttcccgggacacgaacaatctgcacacagtcaagattgacaccaaagttacc
actcagaccacaatgggagccaagaaccttgacctaaaaggtgatctgtacattggtggt
gttaccaaagagatgtaccgtgagctgccgaagttggttcactcccgggagggatttcaa
ggttgcctggcaacactagatctaaatggccgccttccggacctccttgctgacgccttg
acgaccgtggggcaagtggagagaggttgtgaaggtcccagcacaacatgtcaagaagac
tcctgctcaaatcaaggagtctgtttgcagcagtgggagggcttcacctgtgactgcagc
atgacatcatacgccgggccgctctgcaatgatgctgggaccacctatatctttggccgg
gacggcggcgtggtgatttacacgtggccgcctaatgagcgtcccagcaccagggcggac
cggctggctcttggcttcagcacccagcagaaacacgccgttctgctccgagtggacagt
gcatctggccttggagactaccttcagctgcagatagacaagggcaacattagggtggtg
ttcaatgtcggcacagatgacatcaatattgaggagagctccaagttcgtcaatgacggg
aagtaccacgtagtccggttcaccagaagcggtggcaacgcgacgctgcagctcgacgac
ctgccggtcatagagcggtacccctcaggcaacaatgataacgagcgcctggccatcgcc
agacagcgaatcccctatcggctcggtcgagtagttgacgattggctactcgacaaaggt
cgccagctgaccatcttcaacagccagacgacagttcgtgtcggcggaggagagcaaggc
tctgccatgttccagggccagctgtccggcctttactacaacggcctccgcatcctcaac
atggccgccgagggccacccgcacatcagagtggagggcagcgcgcggctggtcggcgac
atgccgtcctcctccatcacgccccagtccagtgccgcagccggcgccaaccggtcagac
tccgccccctcgatcagtgacatcacaaccaccacggcgacgaataagaagcaagtggtg
acacagacggtagacgacctgctggtcgcgtccgccgagtgtccgagcgatgatgaagac
attgacccctgtgacagctcagcccgccctccgccgccagatgtgaaggtgtttcctggt
ccgtccgaggtggtgcgggagagcagcagcaccaccggcatggtggtgggcatcgtggcg
gccgccgccctctgcatcctcatcctcctctacgccatgtacaagtaccgcaaccgcgac
gaaggctcctatcatgtggacgagagccgcaactacatcagcaactcggccacgcagccc
aacggcagcgccaaggacaaaccgctgggcatcgctaagatctctaagaacaagaagaac
aaagacaaggagtattatgtctga
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integrated database retrieval system