Xiphophorus hellerii (green swordtail): 116727638
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Entry
116727638 CDS
T07363
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116727638 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116727638 (faap100)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116727638 (faap100)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Beta-prop_EML_2
KNTC1_N
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
116727638
NCBI-ProteinID:
XP_032431063
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Position
10:23607577..23616915
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AA seq
819 aa
AA seq
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MMEGRCAAEPWAEFGLLGKSGTPLVKCGTGSDVFICTGGEEVYVFTAQEKTLRAVLQMPA
AVRDLAVSHDEQLLFVACRSGVYCVKVQLLVPSSSHDAGSGPTELKISTECLVAVADRVS
SLLVVGSVLLTLCRTDSSWSLTLYQTQRASQSDPCDLLTSFSLPLVSPSVQGDTESRCVL
VCVYPGDVSPTSSRLRPSCSHFPLQPLLFRLLFGAEAALSKSPVVLCGLPDGRLSFLPLR
IPGSRLRILHSLEQPVVFIGASAVMETNAGCAGCLIALGKQGRAVLIGAGGAGSEGGGGA
RFTLGCVPGPVECACMDQSRVYYSTGSDLLTVDLWDSSSGTAGRQGGEEDEGSRSNPAAL
LTPVSLNVSGVTALHQPTCSSAGEVQLLSLSVRGRLQSIRLPVRTQEDGLSKRPSSQVGR
SVGDILSAIGDVCERASVLKTIIRSKNQILKELNQVMNISFLLSNRSEFDSKPVRCRGLV
RWSSLLQRDSLNLTCILENLSPFVLERGWTLSVAVRPLSCPLEAGGDASSVNYSFPFGGL
GPGESVEVSLPVTAEGDASFPVTMTCSLLFSLWRFLGQEEAAAPLDSQRACFSLPLNTLT
VDWLHALRLGDPPAPARSSSNPADLIQGFISSRQLRCRGGGQASRPEEYSARVRVSSELL
RDTLGLTPGGPRVSLLEWLLSEGCGGVKAERKGMKTDGGSSVICGSAPNNAAVKLTAEEV
NIEEKTEPLVTMEVQVKSSSVAAVCGLHHAVLHRIQTLLQKVGSSRTVPIADLRLALQQA
EVERGQVWEASSVGVSSGQMQTLLLRVYQQLRDGPLLML
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggacggtgtgctgctgagccttgggctgagttcggccttttaggaaaatct
ggaacaccgctggtcaagtgtggaactgggtcggatgttttcatctgtactggtggtgag
gaggtttatgtcttcactgcgcaggagaaaacactcagggcggttcttcagatgcctgct
gctgtgagggatctggctgtcagccatgatgagcagctcctgtttgtggcatgcaggagt
ggagtttactgtgtcaaagtccagctgctggtacccagttcctcccatgatgcaggttct
ggtcccactgagttgaagatctctaccgagtgtctcgttgccgtcgcagacagagtgtcg
tccctcctggtcgttggttccgtgctcctgacactttgccggactgactcgtcctggtca
ctgactctgtatcaaacccagcgggcgtctcagtccgacccctgcgacctgctcacctcc
ttctctctgccgctggtctcgccttccgttcaaggtgacacagaatccagatgtgtgctg
gtgtgtgtgtatcccggcgacgtgtcgcccacctcctcccgtcttcgtccgtcttgttcc
cacttccctctccagcctctcctcttcaggcttctgtttggggcggaagcggcgctctcc
aaatcgccggttgtgctctgcggcctgccagacggacgcttgtccttcctccctctgcgc
atcccgggatccaggctccggatcctccacagcctcgagcagccggtcgtgtttatcgga
gcatctgctgtcatggaaaccaatgcaggttgcgcggggtgtttgatagctctgggcaaa
caaggcagagccgttctgatcggggctggtggggccgggtcagagggaggtggcggcgcc
aggtttaccctgggctgcgtcccaggtcccgtggagtgcgcctgtatggatcagagccgt
gtttactacagcaccggctcagacctgctaacggtggatctgtgggacagttcttctggg
acagcaggaagacaggggggcgaggaggacgaggggtcccggtccaaccccgctgctctc
ctcacacccgtcagtttaaacgtgagcggcgtcacggctttgcatcagcctacatgcagc
tctgcaggtgaagttcagctgctcagcctgtcagtcagagggcggctgcagtccatccgt
ctccctgttaggacacaggaggacggtttgtccaagcgtccctcctcccaggttggacgc
agcgtcggggacatcctgtctgccattggggacgtttgtgaaagagcatcagtgctgaaa
accatcatcagatccaagaatcagatcctgaaggagctgaatcaggtgatgaacatcagc
ttcctgctgtcgaaccgttcagagtttgactcgaagccagtcaggtgtcgtggtttggta
cggtggagcagcctgcttcagagagactccctgaacctgacatgtatcctggagaacttg
agtcctttcgtcctggagcgaggctggacgctgagcgtcgctgtccgtcctctgtcctgt
cctctagaagcaggaggggacgcctcgtctgtgaactactccttcccgttcggcggtctc
ggcccgggggagtcggtggaggtgtctctgccagtcacggcggagggcgacgcctccttc
cccgttaccatgacctgttctctcctgttctccctctggaggttcctgggacaggaggag
gcggcggcccctctggactcgcagagggcctgtttcagtttgccgttaaacaccctgacg
gtggactggctgcacgccctgcggctcggcgacccgccggccccagcccggtccagcagc
aacccggcagacctcatccagggttttataagttcacggcagctccggtgcagaggagga
ggccaggcgtccagaccggaggagtattctgctagagtccgcgtgtcgtcagagttactg
agggacacgctggggttgacccctggaggcccccgtgtctctttgcttgagtggctgttg
tctgaaggctgtggtggagtgaaggcggagcgcaaaggaatgaagactgacgggggcagt
tcagtgatctgtggcagtgcgccaaataacgccgcagtcaaactgactgctgaagaggta
aacatagaggagaagacggaacccctggtcaccatggaggttcaggtgaagagctcatca
gttgcggccgtgtgcggcctgcaccacgccgtgctgcatcgcattcagactctgctgcag
aaggtcggttcctccagaacagttcccattgcagatctgaggctcgcgctacagcaagct
gaggtggagcgaggtcaggtctgggaggccagcagtgtgggcgtgtcctctgggcagatg
cagacgctcctcctgcgtgtttaccagcagctcagagacggccctctgctcatgctctga
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