KEGG   Xiphophorus hellerii (green swordtail): 116727647
Entry
116727647         CDS       T07363                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116727647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116727647
   03041 Spliceosome [BR:xhe03041]
    116727647
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116727647
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116727647
Spliceosome [BR:xhe03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116727647
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RBD_AKAP-17A RRM_3
Other DBs
NCBI-GeneID: 116727647
NCBI-ProteinID: XP_032431081
LinkDB
Position
1:16795462..16798989
AA seq 341 aa
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TKQEMQSVGMGMRGGRNSGGRPYDYDRGFNQGGRGRYGDGPNNWNDGGYGGGPGGPGGYN
NGGNRGYNQGYNQGGGGGGGGGYGGNSYDSNGYGNCGGGGGGGGGGSNYNNMGHYDPQAS
NFGPMKNNFGGGGGGGGGGRSFGGYGGGSNNPGGYGRPGRF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgtcaaaagacgtcccacgtgagccggagcagctccgcaagctgttcattggaggcctg
agctttgagacaacagatgagagcctgcgggctcattttgaacaatgggggtcccttaca
gactgtgtggtcatgagagaccccaacagcaagaggtccaggggtttcggctttgttaca
tattcgtcagtgcaggaagttgatgctgccatgtctgcccgtccccacaaagtggacgga
agggtcgtggagcctaagcgtgcagtttctagagaggactcaaaccgtccaggtgctcat
gtaacggtcaagaaaatctttgtgggaggcatcaaagaagacacagaggagtcgcacctt
agggattacttccagcagttcggcaaaatcgaggtcattgatatcatgaccgaccgcaac
actggaaagaagaggggtttcgcttttgtcacgtttgatgaccatgattcagtggatagg
attgtcattcagaaatatcacacaatcaactctcacaactgtgaagtgaggaaggccctc
accaagcaggaaatgcagagtgtaggaatgggaatgagaggagggcgtaacagcgggggg
aggccatatgattacgacagaggcttcaaccagggaggtaggggcagatatggagatggt
cctaataactggaatgatggtggttacggagggggtcctggtggtcctggcggctataac
aacggcggcaacagaggttataaccagggctataaccagggtggtggtggaggtggtggc
ggaggctacggtggaaacagttatgacagcaacggttatggtaactgtggaggaggtggc
ggcggcggcggcggtgggagtaactacaacaacatgggccattatgacccccaggcctct
aactttggcccaatgaagaacaactttggcggtggcggcggcggcggtggtggcggcagg
agctttggtggctacggaggtggctctaacaatcccggtggctatggccgcccaggacga
ttttag

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