Xiphophorus hellerii (green swordtail): 116727750
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Entry
116727750 CDS
T07363
Name
(RefSeq) paired box protein Pax-2a-like isoform X1
KO
K15608
paired box protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727750
04131 Membrane trafficking [BR:
xhe04131
]
116727750
03036 Chromosome and associated proteins [BR:
xhe03036
]
116727750
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116727750
Membrane trafficking [BR:
xhe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
116727750
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116727750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
116727750
NCBI-ProteinID:
XP_032431283
LinkDB
All DBs
Position
10:7723636..7764799
Genome browser
AA seq
406 aa
AA seq
DB search
MDIHCKADPFTAMHLSHVGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDR
LLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGSSLSTPGHTIVPNTVSPPVTSASN
DPAGSYSINGILGIPRSNGEKRKRDDDGSDGSGPNSDSQGSVESLRKHLRADAFTQQQLE
ALDRVFERPSYPDVFPTSDHVKPEQANEYSLPVLNSSLDEVKPSLSSSANPDLGPSVSQS
YPVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRF
SNPALLMPHREAPPLPLLPLPMTVTSYHGNQINLQDHGLSLHIAQV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttcacggcgatgcacctatcccacgtagggcac
ggaggtgtgaaccagctcggcggggtgttcgtgaacggcagacccctcccggacgtggtg
aggcagcggatagtggagctggcccaccagggcgtccggccctgcgacatctccagacag
ctgcgggtgagccacggctgcgtcagcaagatcctcggcagatactacgagactggcagt
atcaagcctggagtcattggtgggtccaaacccaaagtggccactccgaaagtagtggaa
aaaatagcagactacaagagacaaaatcccaccatgtttgcctgggagatcagagacaga
ctgctggcagagggcatctgcgacaacgacactgttcccagcgtctcatccattaatagg
atcatcagaacaaaggtccagcagcctttccatccatctcctgatggatcatcgctttcg
acgcccggtcatacaatagtaccaaacacagtttccccacctgtaaccagcgcctccaac
gaccctgcgggatcctactccattaacgggattttgggtattcctcgatccaacggagag
aagagaaaaagagatgacgatggttcagatggttctggcccaaacagtgattctcagggt
agcgtggagagtttacggaagcacctaagggcagacgccttcacccagcagcagctggaa
gctttggaccgggtctttgagcgcccctcgtaccccgacgtcttccccacctcggatcat
gtcaaaccggaacaggctaatgagtactcgctccctgtcctgaattccagcctggacgaa
gtcaagcccagtttatcctctagcgccaacccagacctgggccccagtgtgtcgcaaagc
taccctgtaggccgggatatggcaaacacgaccttacccgggtatccccctcacgttccc
ccaacaggccaaggcagctacccaacctctacactcgctggaatggttcctgggagtgag
ttttcggggaacccctacagtcatccacagtacacaacctacaacgaagcctggcgattc
agcaatccagcattactaatgccgcatcgagaggctccgcccctcccactgctgccactg
cctatgaccgtcactagttaccatggaaaccaaatcaacctgcaggaccacggcctcagt
ctccatattgcccaggtgtga
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