Xiphophorus hellerii (green swordtail): 116727826
Help
Entry
116727826 CDS
T07363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04260
Cardiac muscle contraction
xhe04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116727826
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116727826
04261 Adrenergic signaling in cardiomyocytes
116727826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116727826
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116727826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
116727826
NCBI-ProteinID:
XP_032431357
LinkDB
All DBs
Position
1:17873418..17988403
Genome browser
AA seq
1086 aa
AA seq
DB search
MQVGRCCVASSVWFMWLVLLFSTQNIGATGVGGTHQSIPPSVVKLWASAFGGEMKSISAK
YSGSQLLQKKYKEFERAVRVEEIDGLRLVKRLAKNMEEMFHKKAQAMKRLVEAAEEAHLQ
HEENPDLQYEYFNAVLINEDVELGGKFVLQPNDHFNNRSVNLSLSVVQVPTNMYNKDSAI
VNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDDHGVIAFDCRNRK
WYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELHYVE
PCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNKTGRGSECSQAI
MLVTDGAVDTYDAIFEKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFTQISTLA
DVQENVMEYLHVLSRPKVIDQEHDTVWTEAYIDSTLPQAQKSDDGQGPVLMTTVAMPVFS
TKNETRNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPLYGD
GKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVTKSVDKGKRVLVLHNDYY
YTDIKGTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVALADEWTYCNTDEHPKHR
YLSQIDAIKMYLSGQEPRLHCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKGVEI
AYLGTRTGLSRINLFVVPDELTNLDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFIYSL
PFNSGSENRSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQRKFWTASRQCAALDGKCS
ISCDDEHINCYLIDNNGFILVAEDYTLTGHFFGEAEGAVMNKLLQMGSFKRVTLYDYQAL
CWVHSESSDSGHTLLDPYFAFFAAVKWILTELVIFLVEFNLYSWWNSDLTAKAQRVGPHM
QVPCDTEYPAFVSERTIKENMGNIDCDGCIKSFVIQQIPSSNLFMVVVDNKCDCSQFGPI
TMDPFEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAGSLTTSLSATLLLAL
MALLLR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgggtcggtgctgtgtggcttccagcgtttggtttatgtggctggtcttactt
ttctcaactcaaaacatcggggcaactggagttggaggcacccaccaaagcattcccccg
tccgtggtgaagctctgggcctctgcatttggaggggagatgaagtccatctctgcaaag
tactctggctcccagcttctgcaaaagaaatacaaggagtttgagcgggcggtgagggtg
gaggagattgatgggctacgactggtgaagaggctggctaagaacatggaagagatgttt
cacaagaaagcccaggctatgaagcgattggtggaggcagcagaggaagcccatctacag
catgaagagaatccagacctgcagtatgaatacttcaatgctgtgctgatcaatgaggat
gtagagctgggaggaaagtttgtcctgcagcccaacgatcattttaacaaccgatcagtc
aacctcagcctcagtgtggtacaggtgccaaccaatatgtacaataaagattctgcaatt
gtcaatggtgtgtactggtcggaggccctgaacaaggtgtttgtggataactttgagagg
gatccctcacttatatggcaatactttggcagtgctaagggcttttttagacaatatcct
ggaatcaaatggaagccagatgaccatggagttatagcttttgactgtcgtaatcgaaag
tggtacatccaggcagccacctctccaaaggatgtggtgatcttggtggatgtcagcggc
agcatgaaaggcctgagacttaccattgccaggcagacggtttcctccattctagacact
cttggagatgatgacttttttaatatcattgcttacaatgaggaactgcattatgtggag
ccatgtctgaacggaactctggttcaagctgatgtcaccaacaaagatcatttccgggag
caccttgataagctgtttgctcaaggcattggtatgttggacatagctctgacggaggcg
ttcaatcttctcagtgattttaataagactggaagaggcagtgagtgtagccaggccatt
atgctggtgacagatggagcagtcgatacatacgatgccatctttgagaagtataactgg
ccagagaggaaggttcgaatattcccctacctgattggtcgggagtcagcctttgcagat
aatttaaaatggatggcgtgtgctaacaaaggctacttcactcaaatttctacgctggcc
gatgttcaagagaatgtgatggagtatctccatgtcctgagtcgtcccaaagttattgac
caggagcatgacacagtgtggactgaggcatacatcgacagcactctcccccaagcacaa
aagtcggatgatggtcaaggtccagtcctgatgacaacagtagcaatgccagtgttcagt
accaagaatgagactagaaacagaggaatcctgcttggggtggttgggacagatgtgcca
gtttctgagctgctcaaaaccattcccaaatataagctgggtattcatggctatgccttt
gcaatcaccaacaatggctacatcctcactcacccagatctacggccactttatggtgat
ggcaaaaagcgaaggaagccgaactacagcagtgtggatctgtctgaagtggaatgggag
gataaggatgacacgttgagaaatgccatggtcaacaggaagacggggaccttctccatg
gaggtgacgaagagtgtggacaaagggaaacgtgtactggttttacacaatgattactac
tacacagatattaaaggcactcctttcagtctaggagttgctctttctagagggcatggg
aaatatttcttcagaggcaatgtcaccgtggaagaaggacttcatgacttggagcatcct
gatgttgcactggctgacgaatggacatactgcaacacagacgagcaccccaagcatcgc
tacttgtctcaaatagatgcaataaaaatgtatctcagtgggcaggaaccccgcttgcat
tgtgacaaggaacttatccaggaagttctctttgatgcggttgtgaccgctccacttgaa
gcctactggaccagtcttgtgctcaataagtcagaaaactcggacaaaggtgtggagatt
gcctatcttggcacaaggacagggctgtccagaattaatctatttgtggtgcctgacgaa
ctcacaaacctagacttcctgacagctgaagacaaagaaggagtgtttaatgctgatcac
tttcctctatggtacaagagagcagcagaacaagttcctggcacctttatttattctctg
cctttcaactcaggttcagaaaacaggagtgttgtattggccagtactgccattcagctt
ttggatgagaggaaatcccccatagctgctgctgttggcatccagatgaagttggagttt
ttccagagaaaattttggacagccagcagacagtgtgcagcattagatgggaaatgctcc
ataagctgtgatgatgagcatattaactgctacctcattgacaacaatggcttcattctt
gtagcagaagactatacactgactggacatttttttggtgaagcagaaggagctgtaatg
aataagttgctgcagatgggctcttttaaacgtgtcacactgtatgactaccaggctctt
tgttgggtccattcagaaagtagcgacagtgggcacacactcctggatccttacttcgct
ttctttgcagctgtaaagtggatcctgactgagcttgtcatattcctggttgaattcaac
ttatacagttggtggaactctgatctcacagccaaagctcaaagggtaggtccgcatatg
caggtgccatgtgacacagagtaccctgccttcgtctcagaaagaacaatcaaggagaac
atgggcaacatcgactgcgatggctgcatcaagtcatttgtgattcagcagatccccagc
agtaacctttttatggttgtggtggacaacaagtgtgactgcagccagtttggacccatc
accatggacccctttgaaattatgtataacgaatcgctcaagtgtgagagactgaagatg
caaaaagacaggaggcgtccagatacctgtcacccttttcatccagaggagaattcaatg
gagtgtggaggagctggcagtctcaccacatcgcttagtgccacgctgcttttagcgctc
atggcattgctccttaggtga
DBGET
integrated database retrieval system
