Xiphophorus hellerii (green swordtail): 116727858
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Entry
116727858 CDS
T07363
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like
KO
K19878
ELKS/RAB6-interacting/CAST family member 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727858
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Others
Others
116727858
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116727858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
GAS
CCDC39
KIF21A_4th
bZIP_1
Motif
Other DBs
NCBI-GeneID:
116727858
NCBI-ProteinID:
XP_032431407
LinkDB
All DBs
Position
1:complement(18032477..18195873)
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AA seq
1156 aa
AA seq
DB search
MPLNIRAKPSHSKLTAAAAKSGGQNDGSSSHSRFSRSTKQGKGKQAVSSGPGSRSGLEPG
SVSGGGPPPAAKLTGAQGSVSKLGSRLKVNTSTADKGSTRGSATAPGGKTMSMENIQSLS
AAYATSGTMYPNERESLEPSGGYPKSTMTLGRSTSRSSSTGRSTAIGSTPNITASGMHHI
SDSCGDQTVFSTGTSSLRRQSGRCTQTLDSDDRGEVSTCDLQAQLRDLQRENESLRRELD
GGRDGKTGYGINSVNFWSPDVKRDKGSRREEGVRTPALKEQCRVNQDDLQLGDIRRNKQL
PLTVQELQEELRAHRETNSRLRQQRQQSSSYREHHMDQEFRGGLSPGHSPRQSSINLHSP
APKNSPKASPSNTYNPRQQEADIIIHSPGYGCNTLAATQRLSPANTLQPGQRNSPSQALY
SPSQGALPSSSPRHPCSPCQVPGCDGFSSPPPQDPTEENFFRLQSEHERQANELSLLRKT
MEEMELRIDSQKQTLGARDESIQRLLELLQGQGQWGRGQRTGIITMAAQEADVHLENIHL
RENTNASFCFDPDVIWQDTKISSLERNIRDLEDEVQMLKTTGLLHPDERQDELKQVEVYK
SHSKFMKTKIEQLKQELNRKDSEMQALQTKLETLTNQNSDYKQHIEVLKESLSAKEQRAN
TLQTEVDALRVRLEEKEQILTKKTNQLQDLSDEKSTLAGEIRDMKDMLDVKERKVNILQK
KIENLLEQLKDKDKQLVGLRERVQGLQTDSSNTDTALATLEEALSEKERVIENLRDQKER
EDRVRLEEMDQMRRENQELKEKLAALQPPKLSQSQVTNSILIQNQRPDGEVEPKVDGFPA
VNPMTPKPEETVRICPDIADRLRLLEQEVARYREESGKSQAEVERLKGALKDAEVDKSCK
EKKITDLERPGQIKSPNIQKQIVPGEMRKDALADGHPHSLSQLCNSQDAMRETAERIMEL
EKALRDTMNTSAHREALWAQEEAARVQAQRQLEELMGALEKTRQELDATKVRLSSTQKCL
HERDGHLNQLRQERRKQLEEILEMKQQALLAAISEKDANIALLELSSSKRKKAQEEVMAL
KREKDRLMHQLKQQTQSRMKLIADNYEEDYIHPQHHPHHLHHMHTANLHHRSLPRGDPHA
NHRPPMDQDDEEGIWA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaaacataagagccaagccctcgcacagcaagctgactgctgctgctgcaaag
agtggtgggcaaaatgatggcagctcatctcattcacgcttctcgaggtctacaaaacag
ggaaaaggtaaacaggctgtcagctcaggtcctgggtcccgatcaggacttgagcccggc
tctgtgtcagggggcgggcctccaccagcagctaaactgaccggagcacaaggttcagtt
tcaaagcttggttcaagactcaaagtcaacacatcaacagcagataaaggatcaactcgt
ggttcagcaactgctccaggtggaaaaaccatgtccatggagaacatccagtctttaagt
gcggcctatgccacttctggcaccatgtatcccaatgagcgggagtccttggaaccctct
ggtggataccctaaaagtaccatgacattagggcggagtaccagccgctcatcttccact
ggccgcagtacagcaattggaagcaccccaaacatcacagcctctggtatgcaccacata
tcagactcttgtggagaccaaactgtgttttctacaggaacttccagtttgcgacggcag
tctggaagatgcacacaaacattggattcagatgatcggggagaggtttccacctgtgat
ctccaggctcagctgagggatctgcagagagagaatgaaagtctccggagggaactggat
ggagggagggatggaaagacaggctatggcattaatagtgttaatttctggagccctgat
gtaaagagagacaaggggagtaggcgtgaagagggagtaaggacgcctgctctaaaggaa
cagtgcagagtgaaccaagacgatttacagctgggggatataagaagaaacaagcaactt
cctttgacagttcaggagctacaggaggagctgagagctcacagagagacaaacagtcgc
ctgcggcaacagcggcagcagagcagctcctaccgagaacaccatatggaccaggagttc
agaggggggctcagtcctggccacagtcccagacaaagttccataaacctgcacagtcca
gcaccaaagaacagccccaaagccagtccatcgaacacctacaatccaaggcaacaagag
gctgacatcattattcacagtcctggctatgggtgtaatacattggcagccacgcagaga
cttagcccagccaacacccttcagcctggacaaaggaacagtccaagccaggccctctac
agtcctagtcagggagcattgcccagctctagcccccgtcatccatgtagcccctgtcag
gtgcctgggtgcgacggcttttcttcacctcctcctcaggatccaacagaggaaaacttc
ttccgactgcagtcagaacatgagcgtcaagccaatgagttgtccctgctgaggaagact
atggaagagatggagttgagaatcgactcccagaaacagacgctgggtgcacgagacgag
agtatccagaggctgctggagttgcttcagggtcagggacagtggggacgaggacagcgg
acaggcataattaccatggcagcccaggaagctgatgtccacttggagaacatacatttg
agagagaacacgaacgcttctttctgttttgatcctgatgttatctggcaggacaccaag
atctcttccctggagagaaacatcagagacttagaggatgaggtccagatgctaaaaacc
accggcctgttgcaccctgatgaaaggcaggatgaactcaagcaggtggaagtctacaag
agccactctaaatttatgaaaactaagatagagcagctgaagcaggagctaaataggaag
gactcagagatgcaggccctgcaaaccaaactagaaacactgaccaatcagaactcggac
tacaagcaacacatcgaggtgctaaaagagtcgctcagtgccaaggagcagcgcgccaac
acactgcagacagaggtggatgctctgcgagtgcgcctggaggagaaggaacagattctg
actaagaaaaccaatcagctgcaagacttaagtgatgaaaagagcacactggctggagaa
atcagagatatgaaggacatgctggatgtcaaggagagaaaagtgaatatcctacagaag
aagattgagaacttgttggagcagttaaaagataaggacaaacagctggttggattgaga
gaaagggttcaggggcttcagactgactccagtaacacagacacagctctggccactctg
gaagaagctttatcagaaaaggagcgagtgattgagaacctccgagaccagaaggaacga
gaagacagggtgaggcttgaagagatggatcagatgaggagagagaaccaggaactgaag
gaaaaattggctgctctgcaacccccaaagctgtctcagagccaggtcaccaactccatc
ttaatccagaaccagaggcctgatggggaggttgaacccaaagtagatggttttccagca
gtcaaccccatgaccccaaaaccagaggaaactgtcagaatctgtccagacatcgcagat
cgtctgaggcttctcgagcaggaagtggcccgctacagagaggagtctgggaagtcccag
gctgaggtggagaggttaaagggagcgcttaaggatgcagaagtggacaaatcatgcaag
gagaagaaaattactgatcttgagagacctgggcaaatcaagtctccaaatatccagaag
cagattgtgcctggcgagatgaggaaagatgccttggcagatggacatccacactcttta
tcacagctttgcaattcccaggatgccatgcgtgagacggcggagcggataatggagctg
gagaaggctctgagggataccatgaacacctcggcccatagggaggccctttgggcgcag
gaggaagccgcccgtgttcaggcccaaagacagttggaggagctgatgggagctttagag
aagactcgccaggagctagatgccactaaagtacgtctgtcctccactcagaagtgccta
catgaacgagatggacacctaaaccaactgcggcaggagagacgcaaacagctggaggag
attctggagatgaagcagcaggcgttgctggcagccataagtgagaaggatgccaatatt
gcccttctggaattatcttcttccaaacgcaagaaagcccaggaggaggtgatggctctg
aaaagggagaaggacagactcatgcaccagctcaaacagcagacccagagcagaatgaag
ttaatagcagacaattatgaggaagactacatccacccccaacatcaccctcatcatttg
caccacatgcatacagcaaatttgcatcaccggagtctgccaagaggggacccacatgcc
aaccaccgacctccgatggatcaggatgacgaagagggtatttgggcttga
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