Xiphophorus hellerii (green swordtail): 116727895
Help
Entry
116727895 CDS
T07363
Symbol
irf1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116727895 (irf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116727895 (irf1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116727895 (irf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
116727895
NCBI-ProteinID:
XP_032431461
LinkDB
All DBs
Position
11:complement(27559246..27562520)
Genome browser
AA seq
291 aa
AA seq
DB search
MPVSRMRMRPWLEKMIDSNTISGLQWVDKDKTMFSIPWKHAARHGWELDKDACLFKEWAI
HTGKYTKGQSSDPKTWKANFRCAMNSLPDIEEVKDKSINKGHQAMRVFRMLPAVSKNKEK
RSKSRDTKSRKKRQAVKEEMESDYSDTQSPVNMCPPEETISTQENTVDSTVNMEHGGFDC
TGEVPELSLLVEIETDPLQNHFSHRFEVSPEHNLEYDYQQDVIEICKILEKESQWMVNTD
SRGFLHNEARTSPGSNWSESSSELEDTPQYTTLGSDFQSNSYEFWNSFSSI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctagaatgagaatgaggccgtggctggagaagatgatcgattcaaacacc
atcagcgggctgcaatgggtggataaggacaagacaatgttctctattccatggaagcac
gcagctcgacacggttgggagctcgacaaagacgcctgtctgttcaaagaatgggccatc
catacaggtaaatacacgaagggacagagtagcgatcccaaaacttggaaagccaacttc
cgatgtgcgatgaactccctgcctgacattgaggaggtgaaagacaaaagcatcaacaaa
ggccaccaagccatgcgggtcttcagaatgctgcctgctgtctcaaaaaacaaagagaaa
aggagcaaatcgagggacaccaagtcgaggaagaagagacaagcagttaaggaagagatg
gagtcagactacagcgacactcagtctcctgtaaacatgtgtccgcctgaggaaaccatc
tccactcaggaaaacacagtagacagcacagtaaacatggaacatggaggattcgactgt
acaggtgaagttccagagttgtccctcttagttgagattgagacagatcctcttcagaac
cacttttcccacagatttgaggtttctcctgaacacaaccttgaatacgactatcaacaa
gacgtcattgagatttgcaagatactggagaaagaatcacagtggatggtcaatacagac
agcaggggattccttcacaatgaagcacgcaccagtccagggagtaattggagtgagtct
tcctcagagttagaagacacaccacagtacacaacactgggctcagacttccagagcaac
tcgtacgaattctggaacagcttttcctcgatttga
DBGET
integrated database retrieval system
