Xiphophorus hellerii (green swordtail): 116728102
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Entry
116728102 CDS
T07363
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116728102
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116728102
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
116728102
NCBI-ProteinID:
XP_032431788
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All DBs
Position
11:complement(13663995..13674667)
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AA seq
1030 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFPPALLNAIQEGKIEMLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPKVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYKIVTMLTQKGHGIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSSDAMLSAFSLSRELRRLSQKEPEFKPQYL
DLEQLCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQEAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLLVSVGIFLTMPFLCLVYWIAPKSKAG
KMVRIPVIKFLLHSASYLWFLITLLGESIIMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMIVLSMYLASFALRVLIMVKGHFLCHDQSNSDECIYF
TQTGRDNWRQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFNFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGVFKCLCCCCNFNSEQKYPPVASMSNDKGTEDNLPYRQQVIRAL
VQRYIESARREFEETKRKDIGNRITELNKAVSRMHLEMKGIQQLLMTDGHAANDALTKDG
SSVLGKYIIGAKNNFRGFNSSQDDKSTSLKVTVHQKEEGADERKADSEAWQDTDAQLDQL
DESEEEELDKAADCEVVKMEEGRAKTELRDWKETENTELVEVSKGDDGVKEDFSEGTGFI
RVEEKVKVESIQGKEDKREGEIDPKVTENLAEIRPEHIESSKTSFETTDAKKTINKFNNM
ELKEKPDEAGWMKGKKYGGNVVERSHVTKGDEKTGNKKVIQSPTGSSSSNDTGFGSQEGE
GSIDGTPVKP
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgagagatcatgaacaagaagatgcgcttccct
ccggcgctcctcaatgccattcaggagggaaaaatagagatgttgtgtggactgctgaag
actggggatggcatcattcgccagctggatgagtcagaggaccgccagtggagggaggct
ctcaacctctccatccgcctgggcaatgaggatgccatggatgcccttctgcagggagta
aagtttgacttccggcagattcacgaggctctgctggtggctgtggacacaaaccagccc
aaggtggtgaaacgcctgttggaccgcctggaccaggagaaaggcaacaagatggatgta
cgatccttctctcaagccatcttcgaccggtccattgacaactcacagtttgcccctggt
gtcacacctctgacacttgcctgtcagaaagatctgtataaaatagtcaccatgctcact
cagaaagggcatggcatcccatggccacataagatatcctgcgcctgtctggagtgtcgc
aacggccggcagtacgacctgctgaagttctccttgtctcgcatcaacacctaccgtggc
atcgccagccgtgcctatctgtccatcacctccagcgatgctatgctcagcgccttcagt
ctcagcagagagctccgcaggttgtcccaaaaagagcccgaatttaagcctcagtacctg
gacctggagcaactctgtcaggagtttgccgtcgagttactgggcatgtgccgtaaccag
agtgaagtcaccacaatcctgaacagctgtggagacgagagccaggacgctttggaccag
gaggcctttgaggagggaatccccaacctgtcacggctgaggcttgcagtcaactacaac
cagaagcagtttgtggcccatccgatctgtcagcaggttctttcttccatttggtgtgga
aacctggcagggtggagaggcagcaggacagcctggaagctcctcgtctctgttgggatc
tttctaaccatgccttttctttgcctcgtctactggatagctccaaagtcgaaggcagga
aaaatggttagaatccctgtgatcaagtttctgcttcattctgcgtcgtacttgtggttt
ctcatcacattactcggagaatccataattatggagatgtatcgtgacaaatttgcatcc
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggttggattcttctgg
tacgagtgtaaggaagtctggattgagggcttgcgaagctacttcctggactggtggaac
tgcttggacatgattgtgttgagcatgtacttggcatcctttgccttacgtgtgctcatc
atggtcaaaggtcacttcctgtgccatgatcagagcaacagtgacgagtgcatctacttt
actcagactggtcgtgacaactggcgccaggaggaccctcagctcatctccgaggtgctg
tttgcagtaaccagcatgttgagcttcacccggttagcctacatcctgccggcccacgag
tccctgggaacgctgcagatctccatagggaagatgattgatgacatgatgaggttcatg
tttatactgatgatcatcgggacggccttcctctgcggcatcaacaatgtctacgttcct
tatgtcatctccccacatcttggcaggtttaatgagaccttcaacttcttattctggacc
atgtttggtgtggccaaccaggactatgtggacatgccgcagtttgttttagcggagttt
gtaggaaggatcctgtacggcatcttcaccctcgttattgtcattgtcctgctcaacatg
ctgatcgccatgatcacaaactcctttcagaagattgaggacgatgcagatgtggagtgg
aaatttgcccggtctaaactgtacctgagctacttcagagagggcctcaccatgcctgtg
cctttcaatatcataccttctcccaaagctgtgttttacatcctgaggggggtttttaaa
tgtctctgctgttgctgcaactttaactcggagcaaaaataccctcctgtagcctctatg
tctaacgacaaaggaacggaggacaacctgccttaccgacagcaggtgatcagagctctg
gtgcagcgctacatcgagtcagctcgcagggagtttgaggagaccaagaggaaagatatc
ggtaaccgaatcacggagctgaacaaggcggtctccaggatgcatcttgaaatgaaaggg
atccagcagcttctgatgactgatggacacgctgcaaacgacgcactgaccaaggacggt
tcttctgtgctggggaaatacatcatcggtgccaagaataacttcagaggttttaacagc
agccaagatgacaaaagcacatcgcttaaagtgacagttcatcagaaagaggaaggggcc
gatgaaaggaaggccgattcagaggcgtggcaggacacagatgcacaattggatcagttg
gatgaaagtgaagaagaagaattggataaggcggcagactgcgaggtggtgaaaatggaa
gagggacgagcgaaaacagagcttagggattggaaagaaactgaaaatacagagcttgta
gaagtaagcaaaggtgatgatggagtaaaagaggacttctcagaagggacgggttttatt
agagtagaagaaaaggtgaaagttgagagcatacagggcaaggaggataaaagggaagga
gagattgaccccaaggtgacagaaaatcttgcagagatcagacctgaacacatagagagc
agcaaaactagttttgaaacaacagatgcgaagaaaacgataaacaagttcaataacatg
gagctgaaagaaaaaccagacgaggcaggatggatgaagggaaaaaagtatgggggtaat
gttgtggaaagatctcacgtgaccaagggggacgagaaaaccggaaataagaaagtgatt
cagtctccaacagggagcagcagctccaacgacaccggctttggttcacaggaaggggaa
ggatcgattgacggcacaccagtaaaaccatga
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