Xiphophorus hellerii (green swordtail): 116728167
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Entry
116728167 CDS
T07363
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116728167 (supt6h)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116728167 (supt6h)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116728167 (supt6h)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116728167 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
Tex_YqgF
SH2
Tex_N
DUF7798
Motif
Other DBs
NCBI-GeneID:
116728167
NCBI-ProteinID:
XP_032431918
LinkDB
All DBs
Position
11:complement(24064292..24079735)
Genome browser
AA seq
1751 aa
AA seq
DB search
MSDFIDSEAEESEEEFEESDLKPKKTQRFLEEDDEEEDVENPEEQDEHGNLRGLIDDDDD
EEGEGEEEAEKSNSGGGSDSEEEVKHWRKKRTYDDCLDDDDLDLIEENLGVKVKRRKKKY
DRVKMLDDDEDDDEKDLIADEIFHVDGEGELEDGEAVDEPIQQADEEEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEG
WDRPKKQTKRRQGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDE
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSFQFEQISADP
DKPLADGIRPLDTADMERLKDVQTLEELSDVYNHFLLYYGRDIPKMQNAAKSKKKKLKKI
KEVSEDGEEEEYEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPLELAKDYICSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKINTKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEDEGLLSIDIC
IDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELK
SKLIAEAKESIVKSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSR
DTPVFCALINGDGEVVDFLRLPYFMKRRNAFREDEREKKAHDVENLKRFLSSKKPHVVAV
AGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSENDFRDYPPLL
RQAVSVARKIQDPLIEYAQVCSTDEDILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVG
VDVNRAIAHPHTQSLVQYVCGLGPRKGAHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVF
NLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKNNEWKLPKDSYYDFDTEAEDQKLDEEFKKKQQRTPYIKRVI
AHPNFHNISFSQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINTEEFEDLDEITARYIQPMASFARDLLGHKYFQDCSGGSKEKMEELLIRT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRW
FKDHYQEPVPGITPTNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQNQNPNATPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPS
QQPLGTPQYPGSTPQSSHVHAHPHLPHPSHHGAPSSHHGHASGTPSSSSSSRRGTPQQQQ
PTPPQPKPSSSASSSAVDWGKMAEQWLKEKEAEDRKKTQRMTPRPSPSPMIESTPMSLAG
DATPLLDEMDR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcattgatagcgaggccgaggaatcagaggaggagtttgaagagagcgac
ctgaaacctaagaagacccagaggttcttggaggaagatgacgaagaagaggatgttgag
aacccagaggagcaggatgagcacggaaatttacgtggactaattgacgacgatgatgat
gaggagggagagggagaagaagaggctgagaaaagcaacagtggtggaggaagcgactca
gaggaggaagtaaaacattggcggaaaaagcggacttatgatgactgcctggatgacgat
gatcttgacttgattgaggaaaatctgggtgtcaaagtgaaaaggaggaagaagaaatac
gaccgcgttaaaatgctggacgacgatgaggatgatgacgagaaagacttgatcgcggat
gagatttttcacgttgacggtgagggagagctggaggacggcgaagctgtcgacgaacca
attcaacaagcagatgaggaagaagagggggaagatgaagagtcagatatagatgatttt
attgtggatgatgacggacagcccatcaccaagaagaggggaaagaagttctcaggatac
acagacgcagccctgcaggaggcccaggagatttttggtggagactttgactttgccgac
tttgacgcagacgcctatgaccagggcgaagaggaagaggaggatcaagacgaagagggc
tgggaccggcccaagaagcagaccaagaggaggcaggggaggaagagcatctttgagctg
tatgagcccagcgagctggaaagcagtcacatgaccgatcaggacaacgagatccgctcc
actgacatgccagagaggttccagttgcgttcaatccctgttaaacctgctgaggatgag
gagttggaggaagaagcagagtggatcttcagacacgggttctccactctgaccatctcc
atgcaggaaagcaccgactatcttgatagaggaacgacaacaaacttcagcaggaaagga
cccagcaccattgccaaaatcaaagaagccctgaacttcatgagaaatcaacagtttgag
gttccattcatagctttctacagaaaggaatatgtagagccagagctgaacatcaacgac
ctgtggaaggtgtggcagtgggatgaaaagtggacgcagctgaaaacccggaaacagaac
ctgacccgtctgttccagaagatgcagtccttccagtttgagcagatatctgcagacccg
gacaaaccgctggctgacggcatccgccctctggacacagccgacatggagaggctgaag
gatgtgcagactcttgaagagctgagcgatgtttacaatcattttttgctctactacggc
cgagacatcccgaagatgcagaacgcggcaaaatccaagaagaagaagctcaagaaaatc
aaagaagtctcagaagatggagaggaagaggagtatgaggttgaagaggaggaggagcag
aaaggtcccgacctgaagctggcgtctcgtagggatatgtacagcatctgtcaaagtgtt
ggactcgacggcctggctaaaaagttcggattgaccccagagcagttcggagagaatctg
cgagacagctaccaacgccacgagacggagcagttccccgccgagccgctagagctggcc
aaagattacatctgcagtcagttctcgactcccgaggcggtgctggaagggacccggtac
atggtggccatgcagattgcccgagagccgctggtcaggcacgtcctccgtcagacgttc
caggagagagccaagatcaacaccaaacctacaaagaaaggcaaaaaggaggtagatgaa
gctcattttgcatattcctttaaatatctgaagaataaacctgtgaaagagctgaatggg
gatcagttcctgaagatgtgcctggcagaggacgagggtcttctttccattgatatctgc
atagatctcataggggtcaaagggtatgctggagaccagacctactttgatgagatcaag
cagttttactacagggacgagttcagccaccaggtgcaggagtggaacaggcagcgaact
ctcgccatagagagagctctcaaccagttcctttacccccagatggccaaggagctcaag
agcaaactgatcgctgaggctaaagagagcatcgtcaagtcctgctgccgccggttgtat
aactggctgaaggtggctccttaccggcccgaccagcaggtggaggaagatgatgacctg
atggatgagagccaggggaaaggcatccgtgtgctgggtgtggcctatgctcccagcaga
gacacaccagttttctgtgctttgatcaacggggatggagaggtggtggacttccttcgc
ttgccgtacttcatgaagaggaggaatgccttcagggaggatgagagagagaaaaaggct
catgacgttgaaaatctgaagagatttctttccagcaagaaacctcatgtggtggctgtt
gctggggagaatcgagatgctcagatgatcatggaggacatcaagaggaccatcagtgag
ctggagcaggagtcttctctgccggccgtcggagtggagctggtggacaacgaactggcc
acgctgtacatgaacagcaagaagtcagagaatgatttcagggattaccctcccttgctg
cgacaagccgtctccgtcgccaggaagatccaggatcctctgatagaatacgctcaggtc
tgcagcactgatgaagacattctctgcctcaagttacacccactgcaggaacatgtggtg
aaggaggatttgcttaacgctctctactgtgaattcatcaaccgggtcaacgaggtcggt
gtggatgtgaaccgagcgattgcccatccccacactcagagcctggtccagtatgtctgc
ggtctgggaccaaggaagggagcccacctcctcaagatcttaaagcagaacaacactcgt
ctggagaacagaacgcagctggttacgatgtgccacatgggacccaaagttttcatcaac
tgcgctggtttcatcaagatcgacacagcatcacttggcgacagtacggactcctacata
gaagtgctggacggttctcgggtccaccctgagacgtacgaatgggctcgcaagatggcc
gtcgatgccctcgagtacgacgagtctgcagaagatgcaaacccagccggagctctggag
gagatcctagaaaacccggaacgccttaaggatctggacctggacgccttcgctgaggag
ctggagagacagggctacggcaacaagggaatcacgctttatgacatccgagcagagctg
agctgcaggtacaaagaccttcgggttccttacagagttcccaacacagaggaggtcttc
aatctgctcaccaaggaaaccccagagaccttttatatcggtaagctaataacgagtata
gtgactggtatagctcaccggcggccccagggagagagctacgaccaggccattcggaac
gacgctacaggcctgtggcagtgtcccttctgccagcaggacaatttccccgagctgagt
gaggtgtggaatcactttgacagcggctcctgtcccggtcaggccatcggggttcggagc
aggctagataacggcgtccagggattcattccaaccaaatttctgagcgacaaagtggtg
aaacaccccgaggagagggtcaaggtgggcatgacggttcactgcaggatcatgaagatc
gacatcgagaagttcagcgttgacctcacgtgccgcacctcagatctgatggacaagaac
aacgagtggaagcttcccaaggacagctactacgactttgacacggaggctgaggaccag
aaactggatgaagagttcaaaaagaaacagcagcgcacaccatacataaagcgtgtgatc
gcccaccccaacttccacaatatcagtttcagccaggcagagaagatgatggagacgctg
gaccagggagacctgatcatcaggcccagcagcaaaggggagaaccatctgaccgtcacc
tggaaagtggctgatggcatctaccagcatgtggatgtgagggaagaaggcaaagaaaat
gctttcagcttgggccatacactctggatcaatactgaagaatttgaagatctagatgaa
attacagctcgatacattcagccgatggcctcgtttgcacgagatctgttgggacataaa
tacttccaggattgcagcggaggaagtaaagagaaaatggaggaattattgatcaggacg
aagcgagagaagccgactttcattccttactttatttcagcctgcaaagacctgccagga
aagtttattttgggctaccagcctcgtggaaaacctcgggttgagtatgtgaccatcacc
ccagatggtttccgctaccgttcccagatctttcccacagtgaatggactctttcgatgg
tttaaggaccactatcaggagccggtgccaggtattactcccaccaacagcagcagaacc
agaacccctgcatctctaaacgcaacgccagccaatattaacattgcagacttaacgcga
gccgtcaacgccctcccacgcaacatgacttcccagatgttcaacgccatcgccgcggtg
acgggccagaaccagaaccccaacgccacccctgcacagtggggctccagccagtacggc
tacggcggcagcacaggaggagggggaggcagctcctctgcttatcatgtgtttgcgaca
ccacagcagcccatggcgacgcccatgatgacgcccagttactcctacacaacgcccagc
cagcagcccctcggcactcctcagtatccgggctccaccccccagtcctcacacgtacac
gcccacccacacttgccacatcccagccatcacggcgctcccagcagccaccacggccac
gcctccggcacgccgtcgtcctcctcttcgtcccgcagaggaacgccgcagcagcaacag
ccgacgccgccgcagccaaagccgagcagcagcgcctcctcctcggcggtcgactggggc
aagatggccgaacagtggctgaaggagaaagaagcagaggacaggaagaagacccagagg
atgacgccgcggccttcgcccagccccatgatcgagagcacgcccatgtcgctcgccgga
gacgccacgcccctgctggacgaaatggaccgatag
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integrated database retrieval system
