Xiphophorus hellerii (green swordtail): 116728308
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Entry
116728308 CDS
T07363
Symbol
robo4
Name
(RefSeq) roundabout homolog 4 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116728308 (robo4)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
ROBO family
116728308 (robo4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_6
Pur_ac_phosph_N
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
116728308
NCBI-ProteinID:
XP_032432203
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Position
11:8602456..8621897
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AA seq
1133 aa
AA seq
DB search
MLVRGWLLGVFCFHTCAGHSQQCKFHSVCLMEPELLDGSLKNPFKEHIRHSLGEQDTPHR
NRAHRRKGSRVRTEDTEPRIVHHPSDVVVKLGSPATLSCRVDGSPKPTIEWLRNGQPLGT
DKGDGRAVPMVLSEGSLFFLNVGGGRRGQTHEGVYTCIATNSAGKATSRNASLYIAVLKE
EFSVQPSDAEVAEGEVAVLNCGPPLGHPEPNVIWKKDGVPISNTDHHYTKLSGKLIIAPA
EKSHSGSYVCVARNIMGERQSRAARLSVLGKPVLVLKPENVSVKTGESAHFYCQARGDPP
PTVAWSRERGPLPNGRYLINPDQTLQLHYVTVQDAGSYTCTAANHVGVVTAVAQLQVEEA
PSTEQKDFHRELSALRVTLENVTIIASESNVSLVQWKLQSLPAQPHYLDGFEVLYRPLLP
VSSDWAALRVSLPGVQAQVGPLKRGYKYEFKVRPYGSSLYGRESNTRHLRVPERAPSAPP
LAVSITVNHEQNNTVHLSWEPPPPDSHNGVVQGYQVWCVESDEQQYHNWTVDSGQHSLDI
STLEPGKQYWVTMAAVNGAGVGTLSDPHGFVIKPQLGGASDPDSHNKDAFPMLALLQDPV
LIGSVGALLWCLLMIAAVFLFRRHNSAGQLSPHHTKAQGLHRLASEDLIIKHRMAAPDSP
WMSGGWRPPFNQKYQDLWAQGHRHPGIRSTSLPVSSKQDGRIVDSAVPMMTDSCGVYGTF
YVDLKGSSLKTFSSPGRCPKAAHALPHQQGAETIQIFTQPDSKSSSLSSQEALPWKQAIR
PQPKMGVLRESWGKKPHGKPELHAVNSVPVLSSRTQNGPSRACKQRLSHVPAGRHGGASQ
GGEGAAGSRLLHYSASLHLVDLLPPPPLMSADRNTLSSDEGSSHSTKLTEDLGSIPSISP
PSGYHGQARPNKHSGAPYSHLSASSYSTLMKADQSPSLTAQEATEYLELTPNPERYSSVL
PEQRPSLPHSFTSTLGSICGPVGSAELEDGAAAGAQPLPAALYHSGLHSSPSSCYSDWDS
SLWNTWSSAMDSNMDSNRTSLISSVDSCYTNDSATFARLLAAAAETMSAASLTDFSPPAS
PLSALYPSFCSDGDAFRELEPIPAWDWSMAWVEEMAAQYGAHYPSRNTKPFNT
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtccgtgggtggcttcttggcgtattctgctttcacacctgtgccgggcactcg
cagcagtgtaagttccacagcgtatgtctaatggagccagaactgctggacgggagctta
aagaacccgttcaaagagcatattcgtcacagcctgggagaacaggacacacctcacaga
aacagggcacaccgaagaaaaggtagcagagtccggaccgaggacacagaaccacgtata
gtccaccacccctctgatgtggtggtgaagctgggcagccctgccactctgtcctgccgc
gtggacggcagccccaagccgaccatcgagtggctgcggaacggtcagcccctggggaca
gacaagggggacggccgggcggtccccatggttctgtccgaggggagcctgttctttcta
aatgtgggagggggcagacgtggccagacccacgagggcgtctacacctgcatcgccact
aacagcgccggcaaggcaaccagccgcaatgcctccctgtatattgcagttctgaaggag
gagttcagcgtccagcccagcgacgccgaggtggcagagggggaggtggctgtcttaaac
tgtggtccgccgctgggacatccagaacctaacgtcatctggaagaaggacggtgttccc
atcagcaacacggaccaccactacactaagctgagcgggaagctgatcatcgcgcctgca
gagaagagccattccggctcctacgtgtgtgtggcccggaacatcatgggagagaggcag
agcagggcggctcgactctctgtgctgggtaagcctgtgttggtgctgaagccagaaaac
gtgtcggtaaagacgggagagtctgcccatttctactgccaggctagaggggaccctcct
cctacggtggcctggagccgagagcgggggccgcttcccaacggcaggtatctcataaac
ccggaccagactctgcagctccattatgtgacggtgcaggatgctgggagctacacctgc
actgctgcgaatcatgtcggcgtcgtcactgcggttgcacaacttcaagttgaagaggct
cccagcactgaacagaaagacttccacagagagctgtcagccttacgagtgaccctggag
aatgtcaccatcatcgcctcggagtccaacgtttccctcgtccaatggaagcttcagtcc
cttccagctcagccgcactacctcgacggctttgaggttctctatcgccccctgctgcct
gtcagctcagactgggcagcactgagggtctcgctgccgggcgtccaggctcaggtcggc
cccttgaagaggggctacaagtacgagttcaaggttcgtccttatgggagcagcctgtat
ggaagggagagcaacactcggcatctccgagtccctgagagagcgcccagtgcgccccct
ctggccgtgtccataacggtgaaccacgagcagaacaacaccgtccatctgagttgggag
cctcctcctcccgacagccacaacggcgtcgtccagggctaccaggtttggtgtgtggag
tctgacgagcagcagtaccacaactggacagtggacagcggccaacacagcctggatatc
tccacactggaaccagggaagcagtactgggtaaccatggcagcggtgaacggtgctgga
gtgggaacgctcagcgatcctcatggatttgtcatcaagccacagctagggggcgcctca
gacccagacagccacaacaaggatgcgtttcctatgctggccctcctccaggacccagtg
ctgattggcagcgttggcgccctcttgtggtgtcttctgatgattgcagctgttttcctg
ttcagacgccacaacagcgctggtcaactgtcacctcaccacaccaaggctcaaggtctg
cacagattggccagtgaagatctcatcatcaaacacaggatggccgctccagattctcca
tggatgtccggtggctggagaccgcccttcaaccagaaataccaggacttgtgggcccaa
ggtcacagacatcctgggatcaggagcaccagtcttccagtctcgtccaagcaggacggc
aggatcgtggactcagctgttcccatgatgaccgacagctgtggcgtctacggaacgttt
tatgtggacctgaagggcagcagcctgaagaccttcagcagtcctggacgctgccctaaa
gcagctcacgccttgcctcaccagcagggggcggagacgatccagatcttcacccagcct
gactccaagtcgtcgtccctcagcagccaggaggctctgccctggaaacaggccatacgt
cctcagccaaagatgggggtgctgagggagtcgtgggggaaaaaaccccacgggaagcca
gagctgcatgcagtgaacagcgtaccggtcctgtcatccagaacccagaacggtccctcc
agagcctgcaagcagagactcagccatgtaccagcaggacgccacggtggagcttcgcag
ggcggggaaggagctgctggttctcgcttgcttcattactctgcctctctgcacttagtg
gacctgctgcctcccccaccgctgatgtccgcagacagaaacaccctgtcctcagacgag
ggttccagtcattccacaaagctgacagaggacctgggctccatcccatcaattagtcct
ccatcaggttaccatggacaagcaagacccaacaagcacagcggcgccccctacagccac
ctgtctgcttcatcctactccacgttaatgaaggctgatcagagtccttccctgacggcg
caggaagccactgagtacctggagctcactcctaaccctgagagatacagcagcgttctg
ccagagcagcgtccctccttgccccacagcttcacctccaccctggggagcatctgtggg
ccggtcggctcggccgagttggaggatggcgcggccgccggagcccagccgttgccggcg
gcgctgtatcattctggccttcacagctcgccgtcctcctgctacagtgactgggacagc
tccctgtggaacacctggagctcggccatggacagcaacatggacagcaaccggaccagc
ctcatcagctcggtggacagctgctacaccaacgacagcgccacgttcgctcgcctgctg
gccgcggccgcagagaccatgagtgcagcctcgctgacggacttctcgccgccggcctcc
cccctcagcgccttgtacccgtcgttctgttcagacggcgatgccttcagggagctggag
cccatccccgcgtgggactggagcatggcctgggtggaggagatggccgcgcagtacgga
gctcactatcccagcagaaacacgaaaccgttcaacacttag
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