Xiphophorus hellerii (green swordtail): 116728321
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Entry
116728321 CDS
T07363
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116728321 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116728321 (sec24a)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116728321 (sec24a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
116728321
NCBI-ProteinID:
XP_032432242
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Position
11:28753961..28779573
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AA seq
1103 aa
AA seq
DB search
MSTAGFNSQNGTGTGQTYTNGPSQNPVALQQPPGVGYGMNHQPAYNPMQAKVLGPPNPAL
YASGPHQPVPPGPQLGSYPPPPAQPLLTRPQIGVLPSHTPPQSASPGPGPRQAQATPPAQ
ATPPPPAVTSTSYYTGPPAWQYAAPRGPAPNHVNPAAAAPSHSSAQPPGPGAPPTSIHGY
PQPGTAPPPMNPPPPHTYQPNRPAYGPPPTAPPARPPGATGTPPPPKVDAQCWGAASSAR
PPTEPDTQEGDVECPGDVAGNGPQAPNSYNHVDNRMAGAAQPGPPGRHLGHYPSLPPGYQ
NTLAPPPSSLHPALQAATQPYTQGPQPYQQQPGGPGPDQLSPSMAAMSLQSGTPEALRVV
NLLQERNLLPPAPVPAPTPCLTQDLQKLNCSPEVFRCTLTSIPQTQSLLNKAKLPLGLLL
HPFKDLSQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPVS
RSYGEPHKRPEVQNATIEFIAPSEYMLRPPQPAVYLFVLDVSHNAVETGYLSVFCQSLLD
NINALPGDSRTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNEC
KELVQDLLKSLPNLFEKTMETQSALGSALQAAFKLLSPTGGRMSVFQTQLPNLGVGALQS
REDPNQRASAKDVQHLSPATDFYKKLALDCSGQQVAVDLFLLSAQYCDLASLGCISRFSA
GSVYYYPSYHHQHNPAQVERFQRDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRS
TDLLSLPNVNPDAGFAVQMSIEENLDDMQVVSFQAALLYTSSKGERRIRVHTMCLPVVSS
LSDVFAGADVQAVTGLLACMAVDRSVTSSLSDARDAMTNAAIDSLSSYRQSALTIQQPGL
LAPACLRLFPLYILALLKQKAFRTGTSTRLDERVFAMYQLKYQPLAFAMLMIHPALYRLD
DLSDEGALNINERTIPQPRVLQLSVEKLSREGAFLMDAGLVMYLWIGRNCHQNFLSQVLG
VSSYAAVPEKLCLLPELDTAESQRTRALVSWLRDQRPFFPSLHIIRDESQLKPHFMQNMI
EDRTESALSYYEFLLHLQQQISK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgccgggttcaactcccagaacgggactgggacgggacagacgtacacgaac
ggtccgtcacagaatcccgttgctctgcagcagccgccaggggtcggctacggcatgaat
caccagccggcctacaacccgatgcaggccaaagtgttgggcccccccaaccccgctctg
tacgcttctgggccgcaccagccggttccgcccggcccgcagttaggctcctaccctccg
ccgccggcccagcctctgctgacgcggccgcagatcggcgttctcccgtcccacaccccc
cctcagtccgccagcccgggcccagggccccgacaggctcaggccacgcccccagctcag
gccacgcctcctcctcctgctgtcacctccaccagctactacaccggccctccagcgtgg
cagtacgctgctccccggggccccgcgcccaatcatgtgaatccagctgctgctgcgccg
tcccacagctccgcccagccaccgggcccaggagccccgcccacctccatacacggatac
cctcagccaggcaccgctcctccaccgatgaaccctccgcctccccacacataccagccc
aacaggcccgcctacggtcctccacccacagcgccccctgctaggcccccaggagccacc
ggtacacctccacctcccaaagttgatgctcagtgctggggggctgccagcagcgcccgg
ccccccactgagcccgacacccaggaaggagatgttgaatgtccaggagatgttgcagga
aacggcccacaggcaccaaacagctacaatcacgttgacaacagaatggctggtgcagct
cagcccggcccgcctggtcggcatttgggccactacccgtccctgccccccgggtaccag
aacaccttggcgccgcctccctcctcccttcacccggcgctccaagccgccacgcagccg
tacactcagggacctcagccgtaccaacagcagcctggcggtcccggtccagaccagctg
agcccgtcgatggcggccatgagcctccagtccggcacgccggaggctctgagagtggtc
aacctgctgcaggagaggaacctgctgccgccagcgccggtccccgccccgacgccctgc
ctcacccaggacctgcagaagctcaactgcagcccagaggttttccgttgcacgctgacc
agcatccctcagacccagtctctgctgaataaagccaagctgccgctgggcctgctgctg
caccccttcaaagacctctcgcagcttcctgtggtgacgtccagcaccatagtgcggtgt
cggtcctgcagaacctacatcaacccatttgtttcctttctggaccagaggagatggaaa
tgcaacttgtgctatcgagtaaatgatgtcccagaagagtttatgtataacccggtcagc
agatcatacggcgaaccgcacaaaagaccagaagtccagaatgccactattgagttcatc
gctccttcagaatacatgctgcggccgccgcagccggccgtctacctgttcgtcctggac
gtgtcccacaacgccgtggagacgggttacctgagcgtcttctgccagtcgctgctggac
aacatcaacgcgcttcccggagactcgcggaccaaagtgggcttcatcaccttcgacagc
accatccacttctacaacctgcaggaggggctttcccagccgcagatgctcatcgtctcc
gacatcgaagatatctttctaccaacaccagacagccttctagtaaaccttaacgaatgc
aaggagcttgtgcaggatctgctgaagagtctgccaaacttattcgagaagacgatggag
acgcagtctgctctgggctcggctctgcaggccgccttcaagctgctgtctcccaccgga
gggcggatgtccgtctttcagacgcagctgcccaacctgggcgtgggggcgctgcagtcc
agagaggaccccaaccagagagcgtctgccaaggacgtccagcacttatccccagcaaca
gatttctacaagaagctggccctggactgctccggccagcaggtggcagtcgacctgttt
ctgctcagcgctcagtactgtgacctggcgtcgcttggttgcatatccagattctcggca
gggagcgtttattactacccctcctatcaccatcagcacaacccggctcaggtggagcgc
ttccagagagatctgaagagatacttaacgcgaaaaatcggctttgaggccgtcatgaga
atacgatgcaccaaaggattgtccatccacacgttccacggaaacttctttgtgcgttcc
acggacctgctgtccctccccaacgtcaacccggatgccggcttcgccgtccagatgtcc
atcgaggaaaacctggacgacatgcaggtcgtctccttccaggctgctctgctttacacc
tccagcaaaggagagaggaggattcgggttcacaccatgtgcctcccggtggtcagttct
ctgtcggatgtgtttgctggagccgacgttcaggccgtcactgggctgctggcctgcatg
gctgtggatcgctctgtgacgtccagcctgagcgacgccagagacgccatgaccaacgcc
gccatcgactcgctgtcgtcgtaccggcagtctgcgctgaccatccagcagcccggcctg
ctggcgccggcctgcctgcgcctcttcccgctctacatcctggctctgctcaaacagaaa
gccttcagaaccggaaccagcacccggctggatgagcgagtgttcgccatgtaccagctg
aagtaccagccgctggcgttcgccatgctgatgatccacccggctctgtaccgcctggac
gacctgagcgacgagggagcgctgaacatcaacgagcggaccatcccccagcccagagtc
ctgcagctgtcggtggagaagctcagcagggagggagcgttcctcatggacgctgggctg
gtgatgtatctttggatcggacgaaactgccaccaaaacttcctctctcaagtcctggga
gtttccagctatgctgctgttccagagaagctgtgtctccttccagagctggacactgca
gagtcccagagaaccagagcgttggtcagctggctcagggaccagcggccgttcttcccc
tccctccacatcatcagggacgagagccagctgaagcctcacttcatgcagaacatgatc
gaagaccggacggagtcggctctgtcctactacgagttcctgctccacctgcagcagcag
atctccaaataa
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