Xiphophorus hellerii (green swordtail): 116728372
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Entry
116728372 CDS
T07363
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04517
IgSF CAM signaling
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116728372
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116728372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116728372
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116728372
Intermediate filaments
Intermediate filament-binding proteins
116728372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
116728372
NCBI-ProteinID:
XP_032432324
LinkDB
All DBs
Position
11:21459200..21494118
Genome browser
AA seq
1590 aa
AA seq
DB search
MKEADRRRENSLLPQTSLLVHLSRAERLGQQVEEKMLMARDTARDEAQKLHRKWLKHQAF
MAELARNKEWLAKIEQEGLELIQEKPELRPVVQQKLEEIRECWSDLETTTKAKARQLFEN
NKPEPAVKSYSDLDSQLSHLEQQPPQLEQAHHLPTFNEQLQKFQAMESQIGDFYKDMGEL
GDLQGLSLPQRGLVAGNKEHGEQSGEVETRIVRLIEPLKERRRILLASKEMHQVAQDLED
EIMWIQERLPLASCKDYGNNLQSVQQHVKKHQTLQRELTGRRARIEEVLDRAAIIASLRT
PEVDFVREGAGHVRQLWEVLQLETERRSVMLDAALQSQQYYSEAAKVESWLSGQKLHVAN
EEKGTDEASTLQLLKAHLALEQTVETYAETVGMLSQQCQHLLELGHPESEQIMKQQSHID
RLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEKWITEREAVASSTELGHDLEEVTVLQ
ERFTKFASETNSVGEQRMEQVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETR
RQMLAASQQLHKFFTDCKEVLAQITGKMKQLPEVRACQANITNPATLQRLMHSFEHALQL
LVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVMDAWKELLSSCEASRIQVTSVTDKVQ
FFSVVRENLMWMEGIMGQIRWDEPRDLTGLEVMMKHHQDLKAKVDGRSKTIQQCADLGKI
LIAAGNPASEEIQEKLDSLLTKQKDMVEKWDKHQERLLRKQEHFQFAQETVKAEAWLKAK
EPLMSSKQQEGEEAQAQTDEVEQLILRHEAFRKAAVTWKERFSSLRQLSAAEKKKEEEKK
TTPLSSRRMFPLSCLTPSVPSTSATSSYLRQTIQAQIEPKPFQTSFDLGTSSATQRLSTT
LASYNPVINGSGYHGLEQQCVGKVGHNSYLGMNQQVAGAGSDSGLSASQSGGAESCTYHG
INHQTPGSAESSGYFGVTTGCLGSLQNHLGAGKLGSSGNIAQQPSSGGMVSPSFLPQQNM
GSSGYLAQPQNLGSSGYLGQQSNMGSSGYLAQQPNLGSSGYLAQQSNLGSSGYLAQQPNL
GSSGYLAQQPNLGSSGYLAQQPNLGSSGYLAQQPNLGSSGYLPQNYQGSGGMGSSGFLAQ
NHYSSGSLGSSGFLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAINPLLEASRLQRE
QFGDIPMADMVGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQA
RLNELPLIVRQERYRRRVERQSSSEQEGSNKQRIQRQDSSDMEGSVKDGSDKRSGEKRST
MAEIVEQVQEREAAHARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPETTRR
SRSAPATGAPTTPQPPSHTAQNEGFLYRKKATSTDLEAQQRSPNSKSWVNVYCVLKEGKL
TFYKDAKNLTATYNGEPSVDMSDCKFDPSMGYKKKKNVFILQVNDGTNFVFHAKDEEDLK
AWTSSITISIAEHDDLAKWDKPGTSSMDPDRSERKEKSEGDADARSERSELVEGEERSEK
GEGSEKLDTSEIADKLEGGAGGSSTSGRSK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagcagatcgcaggagggaaaatagtttgctgcctcagaccagcctgcttgtg
caccttagcagagctgagcgtttgggacagcaggtggaagagaagatgcttatggcccga
gacacggcccgggatgaggctcaaaagctacacaggaagtggctgaagcaccaggccttt
atggcagagctggcccgcaataaggaatggctggccaagatagaacaggagggtctggag
ctgatccaggagaagccggagctgcgtccggttgtgcagcagaaactggaggagatcaga
gagtgctggtcggacctggagaccaccaccaaggccaaggcgcgccagctctttgagaac
aacaagcccgagccggcggtgaagagctactcagacctcgacagccagctctcccacctg
gagcagcagcccccccagctggaacaggcacaccacctgcccaccttcaatgagcagctc
cagaaattccaggcgatggagtctcagatcggggacttctacaaggacatgggggagctg
ggagacctgcagggcctcagccttccccagcgaggcctggtggcgggcaacaaggagcac
ggtgagcagtcgggtgaggtggagacccgcatcgttcgccttatcgagcctctgaaggag
cggcgccgcatcctgctggcttccaaggaaatgcaccaggttgcccaggatctggaggat
gaaattatgtggatccaagaaaggcttcctttagcatcgtgtaaggattatgggaataac
ctccagagtgtgcagcagcatgtcaaaaaacaccagacgctccagagagagctgacaggt
cggcgggctcggattgaggaggtcttggatcgggccgccatcatcgcctcgctaagaact
ccagaggtggacttcgtgcgcgagggagcggggcacgtgcgccagctgtgggaggtgctg
cagctggagacggagaggcgctccgtgatgctggacgccgccctgcagtctcagcagtac
tacagcgaggccgctaaggtggagtcctggctgtcggggcagaagctccacgtcgccaat
gaagagaaaggcacggatgaggcgagcaccctgcagctgctgaaggctcacctggctctg
gagcaaacagtggaaacgtatgcggagacagtaggcatgctctcccagcaatgccagcat
ttactggaactgggacacccagagagtgagcagattatgaagcagcagtcccacatcgac
cgactgtatgtgtccctgaaagacatggtggagcacagaaaaaccaaactggagcagcag
tactggctctaccagctcaacaaggaagttgaggagttagagaaatggatcactgagcgt
gaggccgtggcgagttccactgagctgggccacgaccttgaggaagtgacggtgcttcag
gagaggttcaccaagtttgcctccgaaaccaacagcgtcggcgagcagcgcatggagcag
gtgaacaaaatggtgaacgagatgatcgactgcggccactcggatgcagccaccatcgcc
gagtggaaggacggcctgaacgagtcatgggccgacctcttggagctcatggagacgcgc
aggcagatgctggccgcatcccaacagctgcacaagttcttcaccgactgcaaagaggtc
ttggctcagatcacagggaagatgaagcagctgccagaggtgagggcatgccaggccaac
atcaccaatccagccaccctacagagactcatgcactcctttgagcatgcccttcaactt
ctagttgcacaggtgaggcaactccaggagaacgctgcccagctcaggaccatctatgct
ggcgaaaaggcagaggccatcatggtgaaagagcaggaagtaatggacgcttggaaggaa
ctgctgagctcctgcgaggccagtcgcatccaggtgacctccgtaactgacaaggtgcag
ttcttctcggtggtgcgtgaaaacctaatgtggatggaaggcatcatgggccaaataaga
tgggatgagccaagggatctaacaggtctggaagtgatgatgaaacatcaccaggatcta
aaagccaaagtagacggccgcagcaagaccatccaacagtgtgcagacctcggcaagatt
ttgatagctgcaggcaacccagcgtcagaggagatacaagagaagttggacagtctactc
acaaagcagaaggatatggttgaaaaatgggacaaacaccaggaaaggttactacgcaag
caagaacacttccagtttgcccaggagacggtaaaggcagaagcctggctgaaagccaag
gagccactgatgagctccaagcagcaagagggagaagaggcccaggcccaaacagatgag
gttgagcagctcatacttcgccacgaggccttccgcaaggccgctgtaacctggaaagaa
cgcttcagctccctccgccagctttccgcagccgagaagaaaaaagaggaggaaaaaaag
acaacgccactctccagtcgaagaatgttcccgttatcatgtctaactcctagtgtccct
tcaaccagtgctacctcttcttacttgaggcagacaatacaggctcaaatagaacccaaa
cccttccagaccagttttgacctgggtaccagctctgcaacccagagattgtctacaaca
ctcgccagctataatccagttattaacggttcaggctaccatggactggagcaacagtgc
gttggaaaagtaggacacaactcataccttgggatgaaccaacaggtggctggagctgga
agtgactctggcttatcagcatcccagagtggaggggcagagagctgtacttaccatgga
ataaaccaccaaactcctggtagtgcagagagttctgggtactttggagtgaccacaggg
tgtttgggtagtttgcaaaatcatctaggtgctggtaagttaggcagttcaggaaacata
gctcagcagccaagcagtggcggtatggtaagccctagctttttgcctcaacaaaatatg
ggcagttctggatatttggcccaaccacagaatttgggaagttcaggatatcttggacag
caatctaatatgggaagctccggatatttggcacagcagcctaatctggggagctctggg
tatttggcccaacagtcgaatttgggtagttctgggtatttggcacagcagcctaatcta
gggagttctggatatttggcacaacagcctaatctggggagttctggatatttggcacaa
cagcctaatctgggtagttctgggtatttggcacaacagcctaatttggggagttcagga
tacctaccgcagaattaccagggcagtggtggaatgggaagctcgggttttttggcacaa
aatcattacagcagcggaagtctgggcagctctggtttcctggcccagagtggaggcatc
atggaccctaaaatggcatacgcatggcagcacctgaaagctgactttatgcagcccagg
atcaaccacatccacaaagctataaatcctctcttagaggccagcagactgcagcgagaa
cagttcggagacatcccaatggcagacatggtgggaccagaatcaggactggagcttctc
catggccgtctccagagggatccccgcggcagtcgctcggatccacagatggatcatctg
aggagggaaagggagtacaagctgggaagacagacctctagtgaacaggaaatccaggcc
aggctgaatgagctgccgctgatagtgcggcaggaacgctacaggaggcgcgtagagcgg
cagtcgtccagtgaacaagaggggagcaacaagcagaggatacagagacaggactccagt
gacatggagggctctgtgaaggatggctctgacaaacgctcaggggagaagagatctacg
atggcagaaattgtggaacaagtccaggaaagagaggcggcacatgcacgtggcgagcct
tatcgtcctcctagcagcctctcagcacctgtgactcgttttgatggacgcccccgagcc
cgagaccgtcccaagccaaggaggcggccccgtccaaaagagcctgagacaactcgtcgt
tctcgttcggccccggcaactggtgccccaaccacacctcagcctccatcacacactgcc
caaaatgaaggcttcctctaccgtaaaaaggccaccagcactgaccttgaagctcagcag
aggagccctaatagcaaatcatgggtgaacgtatactgtgtgctgaaggagggaaagttg
actttctacaaggatgctaagaatctgactgcaacatacaacggggagccttctgttgac
atgagtgactgcaaatttgatccttcaatgggctacaagaagaagaaaaatgtcttcata
cttcaagtaaatgatggaaccaactttgtattccatgctaaagatgaggaggatctgaag
gcatggacctcaagtatcaccataagtattgctgagcatgacgacctggccaagtgggac
aaacctggcacctcgtccatggaccccgaccgctcggagaggaaggagaagtcagagggg
gacgcagatgccaggtcagagaggtccgagctggtggagggggaggagaggtccgagaaa
ggcgagggctctgaaaagctagacacatctgaaattgctgacaagctggagggcggggca
gggggctccagcacatctggcaggagcaaatga
DBGET
integrated database retrieval system
