KEGG   Xiphophorus hellerii (green swordtail): 116728392
Entry
116728392         CDS       T07363                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116728392 (zc3h12b)
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     116728392 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 116728392
NCBI-ProteinID: XP_032432364
LinkDB
Position
11:complement(14738878..14755298)
AA seq 856 aa
MTAWSMVEKLKMEKRPCREQNIDSREAEHATDESEDGSSSESESEEQQWRRQQHPHRPQL
GNNSCRKREPLAVTKPHRQLCRSPCLDRPSFSQSSTLQDFRDDDSGGGSVGATPGLKPAS
GREYQTKMEFALKLGYSGDQVETVLNKLGATALINDILAELVRLGNKAEHEAQPCSATVP
STSRPPCVKETVSPEVSVEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEW
FREKLHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDD
RFIVKLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGP
SLENFLRKRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAV
KTMSEGALAKCGTGPAAVKGDVGSEAKRVAPKRQSDPSIRSVACEPIEALSVARKSETNS
VPSLVSALSVPTMQPAKSHAAGALNTRSASSPVPGSLQFAHNSLEHMSSIQYPPILVTNS
HGASVTYSEQFPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRTPSHCP
ESCLSHSNSDSFSSYGELYPSSVDSSLEESIKGQQQAPTQARMQAFSHGFRHDVLTRVQS
YGQEEPKQGPRKQSGAHLAPHIQHATVGARSSCPGDYPLAQNVLPPLSSQPTRSLGMTRM
DSISDSRLYDSNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVR
SMPDKMEQIWNSPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTD
PQQLAAVIVTKLRSCH
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgccgggagcag
aacattgactcaagggaggccgagcatgccacggacgagtccgaggacggaagcagctcc
gagagcgagtcggaggagcagcagtggcggcggcagcagcacccccacaggcctcagctg
ggaaacaacagctgcaggaagagggagcccctcgccgtcaccaaaccccaccgccagctc
tgccgctctccatgcctcgaccggcccagcttttcccaaagtagcaccctgcaagacttt
cgcgacgatgactccggcggcggcagtgttggcgccacaccaggcctcaagcccgccagc
ggaagggagtaccaaaccaagatggagtttgctttgaagctgggctactccggagaccag
gtggagacggtgctcaacaagttgggggccacggcgctcatcaacgacattctcgccgag
ttggtccggctcgggaataaagcggaacacgaagctcaaccctgcagtgccaccgtcccg
tcaacgtcacggcccccctgtgtgaaagaaactgtcagtccggaagtttcagtagaagaa
gaatccgttgatacgtatgataaccttcgacccatcgtcattgatgggtctaacgtggcg
atgagccacgggaacaaggaggttttctcttgtcgcggtatccagctggcggtcgagtgg
tttcgagagaaattacacaaagacatcactgtgtttgtccccgcctggaggaaggagcag
tcgagacccgacgccctcatcacagatcaagaaatcttgcgcaaactggagaaagagaag
atcctggtttttaccccgtctcgaagagtccagggcaggagggtggtgtgctacgatgat
cgcttcatagtgaagctggcttacgattctgatggaattattgtgtcaaatgacaactac
agagacttgcaaaacgagaaaccagagtggaaaaaatttatagaagagcgcctcctgatg
tattcatttgtcaatgacaagtttatgccacctgatgatccgttgggaagacatgggccg
agcttagaaaacttcctccgcaagaggcctgtggttccagagcacaaaaagcagccttgc
ccttatgggaaaaagtgcacatatggtcataagtgcaaatactaccatccggagcgcgtg
aaccaaccacagcgatccgtggccgacgaactgcgagccttcgccaaactgtccgcggta
aaaacaatgagcgaaggggctttggctaaatgtggtacaggtccagccgccgttaagggg
gacgtcggctctgaagcgaaacgcgtggcgcctaaacgccagtccgaccccagcatccgc
tcggtggcctgcgaacccatagaggcgctctccgtcgcccggaagtccgagacgaattca
gtgccttccctcgtgtctgctctcagcgtgcccaccatgcagcccgccaagagccacgca
gccggggcattaaacacccgctcagccagcagccccgttccaggctctctgcagtttgca
cacaactctctagagcacatgtccagcatacagtacccccccattttagtcaccaacagc
cacggcgcctccgtgacgtacagcgaacagttccccaagtacgactcggtcagcgaccac
ggatactactcgctccacagcgatttttccaacatgagcatgagcagcatgcacaacgtg
gacagtttctgtagcatggagcacgagcatgtgtaccagagaacccccagccactgcccc
gagtcctgcctcagccactccaacagcgactcattctcctcctatggggagctgtacccg
agctctgtggacagcagcctggaggagagcatcaaggggcagcagcaggctccaacgcag
gcgaggatgcaggccttctcccacgggtttcgccacgacgttctcaccagagtccagagt
tacggacaggaggagcctaagcaaggtcctcgcaagcagtccggggcgcacctcgcacct
cacatccagcacgccacggtgggagcccgctccagctgtcctggagactacccgctcgcc
cagaacgtcctgccaccattgtcctcgcagccaacgcggtctctagggatgacacgcatg
gacagcatatcggactctcggctgtacgacagcaacccgatgaggcagaggcggccgccg
ctgtgccgcgagcagcatgcgagctgggacccgctgccctgcggcaacgagtcctacgga
tatcactcgtatccgctcagtaacagcctgatgccgtgttgcgagcgggtgatggtccgc
agcatgccagacaaaatggagcaaatctggaactcgccgtgggagaacccgtccgcggcc
gagcaccaagagcggtacgtcattccagatcaccagtaccaaacatacaggaacctctgc
aacatcttccccgcgtacatcgtccactcggtcatggagaagaaccctcatttaacagat
ccacagcagctcgcagctgtgattgtcacgaaactgaggtcatgccactga

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