Xiphophorus hellerii (green swordtail): 116728408
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Entry
116728408 CDS
T07363
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116728408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116728408
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116728408
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
116728408
NCBI-ProteinID:
XP_032432399
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Position
11:18198074..18205246
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AA seq
791 aa
AA seq
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MFHSRLPEFYVKMRKSELFDFHLEADDRTEEEKRKQKAPKKDGLASALGLSKEAPKAPMD
TDYQEEMEPVKPQIRFNLNFDKEIRGEASQPKRDSSTFTIERLFKAVASRDVNKLDGLYQ
YLNQNMKKLSDSLYQSYGKTALMKALLHLKDGKNETIEELVSVSERIGDIKEFVNAAFTD
SYYKGQTALHIAIERRSMSYVKLLVSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAAC
TNQPDIVSYLMENEFPADAKMADSHGNTVLHALVLVADNSKENTEFVTAIYDRILKTNAR
LHPKIKLEEKENNDGVTPLKLAAKNGKIGVFSHILQREFQVNHFKHLSRKFTEWAYGPVH
SSLYDLTSLDTNENNSVLEILIYGSEIPNRHEMLEKEPLSCLLEDKWKKFGRGMFFFNFL
VYLVFLIIFTVVAYNKKDATQLPFIPDDAWDYLYVSGQLLTLLANFYFFVTGIIEMKRKR
PKMQTLLIDGYYEILFFAQGLLFLVATVLYWAGRKEYLGFLVICLALSWVNVLYYSRGDK
HMGIYSVMIQKMILSDILRFLFVYIVFLFGFSAAVVTLLIQAPPENRTGQGRQGFFATSK
PDTECFTPSYRNISYTTLQLFKFTIGMGDMEFTQEYQYMEVFYVLLIGYIILTYILLLNM
LIALMSRTVEKITTESASIWRLQRAVTIMDMERRLPCCLKKSFRSGVERKLCTAIGDDRR
RCFRVEEMNWNKWNTNLVNISEDPGCCDLSQQPDLDSPSRGFNRGRSWRDIFMEGSWRRR
RPPQSTEMSLL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattccagattaccagagttttatgtaaagatgaggaaatcagagctttttgat
ttccatctggaggcagatgatagaacggaggaagagaaacggaagcaaaaggcaccaaag
aaggatggcttggcttctgctttagggttgagcaaggaggcccctaaggcccccatggac
accgactaccaggaggaaatggagccggtcaagcctcaaatccgattcaatctcaacttt
gacaaagagattcgaggtgaggcatcacagccaaagagagacagctccactttcaccatt
gagcgtctgtttaaagcagtggccagcagggacgtcaacaaactggacggcctataccag
tacttgaatcagaacatgaagaaactctctgactctctgtatcagtcgtacggtaaaacc
gccctgatgaaagctctgctgcacctcaaagatggcaagaacgaaaccatagaggagctg
gtcagcgtttcagagaggatcggcgacattaaagagtttgtgaacgccgcattcaccgat
agctactataaaggtcaaactgctctacatatagccattgagaggaggagtatgtcctat
gtaaagctgctggtcagcaaaggtgcagatgttcatgccaaagcctgtgggaagtttttt
cagcctcatgatggtcccaacttctactttggtgagctgcccctgtctctagcagcctgc
acaaaccagcctgacatagtgagctacttaatggagaatgagtttccagcggacgccaag
atggctgactctcacggcaacacagtgctgcacgccctggtgttggtggccgataactcg
aaggagaacacagaattcgtaacggccatttatgatcgcatcctaaagaccaacgcccga
ctgcatcccaagataaagctggaggagaaagagaacaacgatggagtcacacctctcaaa
ctggctgccaagaatggcaagattggggtattttctcacatcttacaaagggaattccag
gtgaatcacttcaagcacttgtcccgtaaattcactgagtgggcttatggacccgtccac
agttctctgtatgacctgacctctttggacacaaacgagaacaactctgttctggaaatt
ctaatctatggcagtgaaattcccaaccgccacgagatgctggagaaggagccgctcagc
tgcctcctggaggataagtggaagaagtttggacgtggaatgttctttttcaacttcctg
gtctaccttgtgttcctgatcatcttcactgttgtagcctacaataaaaaagatgctaca
cagcttccgtttatccctgacgacgcctgggattacctgtatgtttcaggccagctgctg
actttactagcaaacttctatttctttgtcactgggattatagaaatgaagaggaagagg
ccaaagatgcaaacactgctgattgatggatattatgagattctcttcttcgcgcagggc
ttactgttcctggtcgccactgttctgtactgggcggggaggaaggagtacctgggcttc
ctggtgatctgtctggctctcagctgggtgaacgtgctgtactactccaggggcgacaaa
cacatgggcatctacagtgtcatgatacagaagatgatcctcagcgatatcctgcgcttc
ctttttgtttatattgttttcctctttggattctcagcagccgtcgtcacactgctcata
caagctcctcctgaaaacagaacaggacaagggaggcaaggattttttgctacctccaaa
cccgacacagagtgtttcacgcccagctacagaaacatctcctacactaccctgcagctc
ttcaagttcaccatcggcatgggcgacatggagttcacccaggagtaccagtacatggag
gtcttctacgtcctccttatcggctacatcattctcacctacatcttgctcctcaacatg
cttatagccctaatgagccgcacagtggaaaagatcaccacggagagcgccagcatttgg
aggctgcagagggctgtcacaatcatggacatggagaggcggctaccctgctgtctgaag
aagagttttcgctctggggtggagaggaaactctgcaccgctattggagacgatcgtcga
aggtgtttcagggtcgaggaaatgaactggaacaaatggaacaccaacctggtcaacatc
agtgaggatccaggatgctgtgatctgagccagcagcctgatttggacagcccttccaga
gggtttaacagagggaggagctggagagacattttcatggagggttcttggaggaggagg
aggccgcctcagtccaccgagatgagcctcctgtaa
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