Xiphophorus hellerii (green swordtail): 116728445
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Entry
116728445 CDS
T07363
Name
(RefSeq) dystroglycan-like
KO
K06265
dystroglycan 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03273
Virion - Lassa virus and SFTS virus
xhe04512
ECM-receptor interaction
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116728445
03268 Virion - Orthopoxvirus
116728445
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116728445
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116728445
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Gene cluster
GFIT
Motif
Pfam:
DAG1
a_DG1_N2
He_PIG
DUF4064
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
116728445
NCBI-ProteinID:
XP_032432464
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Position
1:complement(20232196..20248999)
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AA seq
908 aa
AA seq
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MWPSWWFTDICCAAQRPLDMHYILYRDMSCRDAGRSRFPSCRTLPVVIWLLATLAHGAMP
DQQETLVDMISVELEASMQSSVMSELQAAASSVGEGPPTAIPDSSVGNGVHTNIPDSSAI
VGQVFQLKVPPGPDHASCNIQLTEMGRETLPSWLYWDKERCTLRGLALEQDKGVYHILVS
GEQITEGTSSQVYPSTVFTVEVYPEERADTEPALLTLQSDISGLQPFTCGSEEPVTVLTV
ILDADLTKMVAEQRVSLLGLMRKFSHVPLEHMRVVPVVNNRLFDMSAFMAGPGNAKKVVE
NGALLSWKVGCALDQPSIPDISSVQSSAKDGTMSARLGYPVVGWHIVNKKPHVVKRIRRQ
LYNTPTPVPSLLPPTVNQEPLSRVVPTPTSPSIAPATDNSTPPVRGPLPLPVKPTLRVKD
QIAHTPVFGPPQPTRVLGTTSTIPIMPTMTRPTILGPTASPTPPGASKKPKTSKKPKKPR
MSTPAPREPKSTTPKTTIRTTTLTLTTDLNQNPEIRNPIDQVTAWVGTYFEVKIASDAFY
DREDGTTDKLRLTLKKTPKEAVSETSWIQFNSSIQLLYGLPDEEHAGDHEYFMLATDKGG
KSIMDAFEVRVNRWTSNDKPSVVFAARFHGDPKTLSENVHNKILLTKKLAYALGDRNTST
VTLRSITKGSIVVEWTNNSIQQNFCPKEQITALTKRISDSQGTPSPAFIKAMEPEFKPIS
ISVRGTNKCQSYTFIPPGEVPMPALPTATPSPGTSQRSSDDVYLHTVIPAVVVAALLLIA
GIIAMVCYRKKRKGKMTIEEQATFIKKGVPIIFADELDDSKSPPSSSIPLILQEEKPPLP
PPEYPNMAGPHSTLLHQDLLEEYSVYQDDDPNAPPYQPPPPFTVPIEGKGSRPKNMTSYR
SPPPYVPP
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtggccttcttggtggttcacagacatctgctgtgcagcccaaaggcctcttgatatg
cactatatactatatagagacatgagctgcagggatgcggggaggagcaggtttccttca
tgcaggactctccctgttgtaatatggcttctggctactctggcccatggcgccatgcca
gatcagcaagaaacactggtggacatgatatctgtggaactagaggcctctatgcagtcc
tctgtgatgtctgagctccaggctgcagcatcctctgttggtgaaggaccccctacagct
ataccagattcttctgtggggaatggagtccacacaaacatcccagattcctcagcaatc
gtaggccaggtgttccaattgaaggtacctcctggacctgaccatgcaagctgcaacatc
cagctcactgagatgggaagagagaccttgccctcctggctctactgggacaaagagaga
tgcactctaagaggattggctctggagcaagataaaggtgtatatcatattttggtgtca
ggggagcagataactgaagggacaagtagccaagtgtatcccagtacagtcttcacagtt
gaagtgtacccagaagaacgggctgacactgagccggctctgctcactctgcagtctgat
atcagtggcctgcagcctttcacctgtggttcagaggagcctgtcacagtccttactgtc
atcttggatgctgatttgacaaagatggttgctgaacagagggtcagcttattaggactg
atgaggaaattctctcatgtgcctctggagcacatgagagttgtacctgttgtaaacaat
cgcttatttgacatgtctgctttcatggctggaccaggaaatgcaaagaaagttgtggag
aatggagccctgctgtcatggaaagttggatgtgcgcttgatcagcccagcattcctgac
atcagcagtgtacagtcctcagcaaaagatgggacaatgtcagctaggttgggttaccca
gtggttggctggcatattgtcaacaaaaagccccatgtagtgaaacgtatcaggcgtcag
ttgtacaacactcctactccagtgccatccctacttccccccactgtcaaccaagagcct
ctttctcgtgttgttcctaccccaacttcaccctctattgccccagcaacagacaactct
actccccctgtccgagggcctttacctttaccagtgaagcccacattgagggtcaaagat
caaatagctcatacacctgtctttggacctcctcaacctaccagagtgttgggaactacg
agtaccattccaatcatgcctaccatgactcgaccgacaattttagggcccactgcttcg
ccaacgccaccaggtgccagcaaaaaaccaaaaacttcaaagaagcccaagaaacccaga
atgtccacccctgctccccgtgaaccaaagtccaccactcctaaaacaaccatacgtaca
actactcttactctgaccacagacttgaatcaaaacccagaaatccgcaacccgattgat
caagttacagcatgggttggcacgtactttgaggtcaaaattgcttcggatgcgttttat
gaccgagaagatggtaccactgacaagttgcgtttgactctgaagaagaccccaaaagaa
gccgtgagtgaaacctcctggatccagttcaacagcagcatccagcttttgtatggcctt
cctgatgaggaacatgcaggggatcatgaatacttcatgctggccactgataagggtggg
aagagcatcatggatgcatttgaggttcgagtcaaccgctggactagcaatgacaaacca
tcagtggtgtttgctgctcgttttcacggtgaccccaaaacgttaagtgaaaatgttcac
aataagattcttttgactaaaaaactggcctatgccctgggggaccgaaataccagcaca
gtgaccctcaggagcatcactaaaggatccattgtggttgaatggaccaacaatagtatt
cagcagaatttctgtccaaaagaacagataactgctctcaccaaaagaatctcagattcc
caaggaacaccttcgccagccttcatcaaggccatggagcctgaatttaaacccataagc
atctcagtccgtggtaccaataaatgtcagagctacacattcattccaccaggagaggtg
ccaatgcctgcccttcctacagccacaccgtctcctggtacaagtcaaagaagtagtgat
gatgtttacctccacacagtgatccctgctgttgtggtggcagccttgttgcttatagct
gggatcattgcaatggtctgctatcgcaagaagcgcaaagggaaaatgacaatagaagaa
caggccaccttcataaagaagggcgttcccataatatttgctgatgaactggatgattcc
aagtctccaccatcctccagcatccctctaatcctgcaggaggaaaaaccgcctcttcct
cctcctgagtaccccaacatggctggcccccacagtaccctgctccaccaggatctgctg
gaggagtattcagtctaccaggatgacgatcccaatgctccaccttatcagcccccaccc
cctttcaccgttccgattgagggaaaaggctcacgccccaagaacatgacatcctacagg
tcaccacctccctatgtacctccctaa
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