Xiphophorus hellerii (green swordtail): 116728446
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Entry
116728446 CDS
T07363
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 2-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116728446
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116728446
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116728446
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116728446
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116728446
Protein kinases [BR:
xhe01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116728446
CD molecules [BR:
xhe04090
]
Proteins
116728446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C1-set
LPD29
Motif
Other DBs
NCBI-GeneID:
116728446
NCBI-ProteinID:
XP_032432460
LinkDB
All DBs
Position
11:7765318..7780568
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AA seq
1020 aa
AA seq
DB search
MRLHSVLLLIALGACAAAEPPGPTLIQLNSIFQPNQSEVILTAGSKVQLGCLGDGLVNMS
TTALRPLPRNCRNILQINSVSPRHTGTYHCRYANQSLDHLNIWIHLYVKDPGNNSTVFVT
PRSTPRYPKEGDNFLYRCLLTDPSVTDLTLQSEGEDRGRGLPPGMNVTLDPRKGALIKHI
RKTFKGRYSCSGWRNGQEFRSEPFALMVAPMDRPPSVAVSQGEWVRLQGERFTVTCQSSN
PSHSYTVTWTHPHTKDLRVSETTTYVNGYFNISSTLTVSAVNHQHSGLYTCTAVGRAGVA
TATTHLTVLDHPYLRIYLQTANTQQVSDELPGNFSREETTEEPAANVSFGLEELQRELVF
NGSRGSGYRRVEVFEGGDLTLTFIMEAYPPIRQHHWTTPEHVNNDGSSTYERSYTATAYR
SEANLLVRRIRQEDAGRYSFNFSNLFFNGSQDVDLRIYHPPTVSVTQQNQSLMCSGSGYP
RPTVLWSVCTHVDRCEPSSNHQVSPSAATSEDGEEVRIFFPLSSPDDDVTVKCLAYNLVG
ESRQVFVHRSTGLRTVFTPALIGALSVSSVLLLLLLIVFYKCRQKPRYEILWKIIESNDG
NNYTFIDPTQLPYNQKWEFPRDKLRLGGVLGSGAFGKVVEATAYGLGTENKATRVAVKML
KPSAHSEEREALMSELKILSHLGYHDNIVNLLGACTQGGPMLMITEYCSQGDLLNFLRTH
APDFMASMITVDEVGDEVFYKNLTGQQERLRSDSGISCWSEYQEMQPALAPGPNEPGEHM
VSLSLCDLLRFSYHVAQGLDFLSSRNCIHRDVAARNVLLTDCRVAKICDFGLARDIQNDD
SYIVQGNARLPVKWMAPESIFQCLYTVQSDVWSYGVLLWEIFSLGKSPYPNVVVDTNFYK
MIKDGHHMEQPEFAPNEMYHLMKLCWSGEPTHRPTFKTIGQLIERLLPLTSDMLPRHSDQ
VMYANIDECRAEEEEEEEEEEEDEVQGGILKRKEEEQADRRDDGEGEEREPTMNNIYQLS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccattcagtgctgctgttgatcgccctcggtgcctgcgctgctgcagaacct
ccaggaccaacactgatccaattaaactcgatcttccaaccaaaccagtcagaggtcatt
ctgactgccggctctaaggtccagctcggttgccttggtgacgggttggtgaacatgtcc
accactgcgcttcgtccattaccgaggaattgtcggaacatcttgcagatcaacagtgtg
tctcccagacacaccggtacataccattgcaggtacgccaaccagagcctggaccacctg
aacatctggatacacctgtatgtcaaagatccaggtaacaactctacggtgtttgtcacg
cctcgctccacacctaggtatcctaaagagggtgacaacttcctgtacaggtgtctgctg
actgacccgtctgtcacagacctcaccctccaatcagagggtgaggacagggggcggggc
ctgcccccaggtatgaatgtcaccttagaccctcgaaaaggagccttgatcaaacatata
aggaagaccttcaaaggccggtactcctgttcgggttggaggaatggtcaagagttccga
tcagagccgtttgccctgatggtggctcccatggaccgccctccctccgtcgctgtcagt
cagggtgagtgggtccgtctacaaggagaacggttcacagtcacctgtcagagcagcaac
ccttcacacagctacaccgtcacctggacccacccacacacaaaggacctgagggtcagc
gaaaccacgacctacgtcaatgggtactttaacatcagcagcactctgaccgtctctgct
gtcaaccatcaacacagcggactgtacacctgtactgctgttggcagagctggggttgcc
acggcaaccacccacctgaccgtgttggatcacccttacctgaggatctaccttcagact
gccaacacccagcaggtttccgatgagctgcctggcaacttcagcagggaggagacgact
gaggaaccagcggctaacgtcagcttcggtttggaggagctgcagagagagctggtgttt
aacgggagcagaggcagcggctacaggagggtggaggtgttcgaaggtggagacttgacc
ctgaccttcatcatggaggcctatcctccaatcagacagcatcactggacgacaccggaa
cacgtaaacaatgatggcagcagcacgtatgagaggagctacacagctaccgcctacagg
tcagaggccaaccttctggtgcggcgcattcgtcaggaagatgccggtcgatattctttt
aatttttcaaacttgttctttaacgggtcgcaggatgtggacctccggatctaccatcct
ccgactgtcagtgtcacgcagcagaaccagtccctgatgtgcagcgggtctggttatcca
cggcccacggtcctctggtccgtctgcacccacgtggacaggtgtgaacccagctccaac
caccaggtgtctccatctgctgcaacctcagaggacggggaggaggtgaggatattcttt
cctctgtccagccctgacgatgatgtcacagtcaagtgtttggcgtacaacctggtgggc
gagtctcgtcaagtgtttgttcatcgttccacaggacttcgcaccgtcttcactccagct
ttgattggagcgctgagcgtctcctccgtcctcctcctgctgctgttgattgtgttctac
aagtgcagacagaaaccaaggtatgaaattctgtggaagatcattgagagtaacgatggc
aacaactacaccttcattgaccccacccagctgccatacaaccagaagtgggagtttcct
cgagacaagctgcgactcgggggcgtcctgggctcgggggcgtttggaaaggttgttgag
gcgacggcgtacggcctgggaacagaaaacaaggccaccagagttgctgtcaagatgctc
aaacccagcgctcactcagaggaacgggaggctctgatgtcagagctgaagatcctcagc
catcttggttaccatgacaacattgttaacctgctgggagcgtgcacgcaaggaggcccc
atgctaatgatcacagagtactgtagccagggcgacctactcaacttcctacggactcac
gcgccagacttcatggcgtccatgatcaccgtagacgaggttggagacgaggtcttctat
aagaacctgacaggacagcaggaaaggctacgcagtgacagtgggatttcatgctggtca
gagtaccaggagatgcaaccggcactggctccaggtccaaatgagccaggtgagcacatg
gtgagcctgtccctctgtgacctcctgaggttttcctaccacgtggctcagggattggac
ttcctgtcctccagaaactgcatccacagagacgtggctgcgaggaacgtcctgctgacc
gactgtcgggttgcaaagatctgtgacttcggtttggctcgagacattcaaaacgatgac
agctacatcgttcagggaaacgcccggctgccggtgaagtggatggctccagagagcatc
tttcagtgtctgtacacagttcagagtgacgtctggtcctacggggtcctgctctgggag
atcttctctctgggtaagagtccgtaccccaacgttgttgtggataccaacttctacaag
atgatcaaagatggccaccatatggagcagccggaattcgctcctaatgaaatgtatcac
ctgatgaagctctgctggagtggggagcccacccacagacccacctttaaaaccattggt
cagctcatcgaaaggctcctccccttgaccagtgacatgttgccgcgtcacagtgaccag
gtgatgtatgcaaacattgatgaatgcagagcagaagaagaagaagaggaggaggaagag
gaggaggatgaggtccaaggtggaatactgaagagaaaagaagaagagcaagcagatcgc
cgtgacgacggtgaaggagaggagagggagccgacgatgaacaacatctaccagctctcc
tga
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